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0
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0
replies
545
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Comparing genome sizes of MAGs having different genome completeness.
Metagenome MAGs Bacteria
3.1 years ago by Naren ★ 1.0k
3
votes
6
replies
8.2k
views
Problem accessing SRA data using sratoolkit.
sra-toolkit
updated 5.2 years ago by • 0 • written 9.9 years ago by ★ 1.0k
0
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0
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6.1k
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Answer: A: calculating abundance of metagenomes
5.2 years ago by Naren ★ 1.0k
0
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1
reply
5.3k
views
Comment: C: phylogenetic tree after ortholog finding by orthoMCL
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 1.0k
1
vote
0
replies
5.3k
views
Answer: A: phylogenetic tree after ortholog finding by orthoMCL
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 1.0k
31
votes
12
replies
19k
views
12 follow
How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
paml
updated 3.2 years ago by ▴ 1000 • written 12.5 years ago by ★ 1.0k
0
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0
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4.3k
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Comment: C: Phylum And Genus Abundance Calculation In 16S Rna And/Or Wgs
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 1.0k
2
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1
reply
2.5k
views
Comment: C: extract gene id form excel and save into new files
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 1.0k
1
vote
0
replies
7.8k
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Answer: A: 16S rRNA alignment
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.0k
0
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1
reply
4.1k
views
Comment: C: extract sequences from a fasta file and save into different files
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.0k
0
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0
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4.5k
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Answer: A: pipelines for pan-genome analysis
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 1.0k
2
votes
1
reply
2.9k
views
qiime: Bacterial abundances from processed 16s reads
next-gen sequencing
updated 7.0 years ago by 45k • written 9.6 years ago by ★ 1.0k
2
votes
0
replies
2.9k
views
Answer: A: qiime: Bacterial abundances from processed 16s reads
updated 7.0 years ago by 45k • written 9.6 years ago by ★ 1.0k
0
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0
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2.5k
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Answer: A: BPGA cause problem during running
7.2 years ago by Naren ★ 1.0k
1
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0
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7.0k
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Comment: C: BPGA - Bacterial Pan Genome Analysis pipeline
7.2 years ago by Naren ★ 1.0k
0
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0
replies
2.3k
views
Comment: C: comparison between two orthologs
7.6 years ago by Naren ★ 1.0k
0
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1
reply
2.3k
views
Answer: A: comparison between two orthologs
7.6 years ago by Naren ★ 1.0k
0
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1
reply
2.3k
views
Comment: C: comparison between two orthologs
7.6 years ago by Naren ★ 1.0k
1
vote
1
reply
1.4k
views
Forum: What are the advantages of purchsing KEGG FTP access over public resources?
KEGG
updated 2.3 years ago by 45k • written 7.7 years ago by ★ 1.0k
0
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0
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2.8k
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Comment: C: What is unique identifier for organism in NCBI gbff file?
7.7 years ago by Naren ★ 1.0k
0
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4
replies
2.8k
views
What is unique identifier for organism in NCBI gbff file?
genome sequence
updated 7.7 years ago by 56k • written 7.7 years ago by ★ 1.0k
0
votes
1
reply
12k
views
Answer: A: Memory-Efficient Way To Transpose Csv/Text File?
7.7 years ago by Naren ★ 1.0k
1
vote
1
reply
38k
views
Comment: C: Automatically Getting The Ncbi Taxonomy Id From The Genbank Identifier
7.8 years ago by Naren ★ 1.0k
11
votes
6
replies
6.7k
views
How To Find The Pan Genome Of 30 Bacterial Strains
genome bacteria
updated 3.0 years ago by 45k • written 12.8 years ago by ★ 1.0k
1
vote
0
replies
2.4k
views
Answer: A: how to use pan-genome in python?
8.6 years ago by Naren ★ 1.0k
2
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1
reply
2.8k
views
Answer: C: Comparative Baterial genome alignments
8.7 years ago by Naren ★ 1.0k
0
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0
replies
2.8k
views
Comment: C: Comparative Bacterial genome alignments
8.7 years ago by Naren ★ 1.0k
3
votes
0
replies
23k
views
Answer: A: How Can I Download Or Get A Pathway List From Kegg
8.8 years ago by Naren ★ 1.0k
2
votes
1
reply
3.1k
views
Calculating relative abundances of bactria in healthy human gut from 16s reads
bacteria 16srRNA
updated 3.2 years ago by 45k • written 9.7 years ago by ★ 1.0k
0
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0
replies
4.8k
views
Comment: C: Correspondance Analysis by using CodonW- codon usage biase
9.0 years ago by Naren ★ 1.0k
0
votes
1
reply
3.0k
views
Comment: C: PERL: how to print specific length of residues before and after a motif?
9.1 years ago by Naren ★ 1.0k
1
vote
2
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3.0k
views
Answer: A: PERL: how to print specific length of residues before and after a motif?
9.1 years ago by Naren ★ 1.0k
0
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0
replies
5.4k
views
Answer: A: Error running OrthoMCL
9.1 years ago by Naren ★ 1.0k
1
vote
0
replies
5.3k
views
Answer: A: Learn to develop bioinformatics tools
9.1 years ago by Naren ★ 1.0k
1
vote
1
reply
2.4k
views
Comment: C: PICRUSt run fails to start.
9.2 years ago by Naren ★ 1.0k
4
votes
3
replies
2.4k
views
PICRUSt run fails to start.
next-gen sequencing software error
updated 9.2 years ago by 11k • written 9.2 years ago by ★ 1.0k
0
votes
0
replies
1.8k
views
Assigning function and pathway to bacterial gene vs eukaryotic genes.
sequence genome sequencing gene
9.2 years ago by Naren ★ 1.0k
1
vote
1
reply
3.9k
views
Answer: A: Looking for a tool for analyzing human microbiome data
9.2 years ago by Naren ★ 1.0k
1
vote
1
reply
2.8k
views
Comment: C: Comparative Baterial genome alignments
9.2 years ago by Naren ★ 1.0k
4
votes
8
replies
16k
views
How To Decide Best Docking Conformation From Autodock Results?
docking
updated 9.3 years ago by ▴ 550 • written 12.3 years ago by ★ 1.0k
0
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1
reply
9.5k
views
Comment: C: Converting *.con.tre into Newick format
9.4 years ago by Naren ★ 1.0k
0
votes
0
replies
62k
views
Answer: A: Tools to view fastq file
9.4 years ago by Naren ★ 1.0k
1
vote
0
replies
1.9k
views
Comment: C: Bio::Phylo tree drawer text
9.4 years ago by Naren ★ 1.0k
0
votes
0
replies
2.3k
views
Comment: C: sequence gi number of updated sequences
9.4 years ago by Naren ★ 1.0k
13
votes
11
replies
3.3k
views
Forum: Presenting "Role of genomics in cancer" to graduate students from different fields.
ChIP-Seq SNP next-gen gene
updated 2.4 years ago by 45k • written 9.5 years ago by ★ 1.0k
0
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2
replies
3.3k
views
Comment: C: Presenting "Role of genomics in cancer" to graduate students from different fiel
9.5 years ago by Naren ★ 1.0k
1
vote
0
replies
3.3k
views
Comment: C: Presenting "Role of genomics in cancer" to graduate students from different fiel
9.5 years ago by Naren ★ 1.0k
0
votes
0
replies
5.2k
views
Comment: C: Pan- and core- genome in bacteria
9.5 years ago by Naren ★ 1.0k
0
votes
0
replies
2.5k
views
Comment: C: Where should this tool be published?
9.5 years ago by Naren ★ 1.0k
0
votes
0
replies
2.5k
views
Comment: C: Where should this tool be published?
9.5 years ago by Naren ★ 1.0k
179 results • Page 1 of 4
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