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1
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1
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1.1k
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DGE adjusted p-value
cell single p-value stats
updated 3.5 years ago by 15k • written 3.5 years ago by ▴ 90
1
vote
1
reply
1.0k
views
Ligand Receptor Interaction Algorithm
cell single CCI
updated 3.6 years ago by ▴ 190 • written 3.6 years ago by ▴ 90
0
votes
0
replies
552
views
Finding Shared Patterns Between Patients with Commonality
Modeling Statistical Statistics
3.7 years ago by fouerghi20 ▴ 90
0
votes
0
replies
507
views
Database for Cell Lines' IFNbeta production
Database
4.0 years ago by fouerghi20 ▴ 90
1
vote
1
reply
1.4k
views
Analyzing TCRseq Data
tcr TCRseq scRepetoire Immunarch
updated 4.2 years ago by ▴ 280 • written 4.6 years ago by ▴ 90
0
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0
replies
1.4k
views
Comment: Comment: Gene Regulatory Networks on Single Cell RNAseq Datasets
4.3 years ago by fouerghi20 ▴ 90
0
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0
replies
1.1k
views
Comment: Comment: Detecting RNA Editing in Single-Cell RNA-seq
4.3 years ago by fouerghi20 ▴ 90
2
votes
2
replies
1.1k
views
Detecting RNA Editing in Single-Cell RNA-seq
scRNAseq RNAediting
4.3 years ago by fouerghi20 ▴ 90
2
votes
2
replies
1.4k
views
Gene Regulatory Networks on Single Cell RNAseq Datasets
GRN Transcription scRNAseq ChIPseq Factors
4.3 years ago by fouerghi20 ▴ 90
0
votes
0
replies
675
views
Batch Effects in Multiplexed Perturbations
demultiplexing cellhashing singlecell scRNAseq
4.4 years ago by fouerghi20 ▴ 90
0
votes
0
replies
2.2k
views
Comment: C: Creating HTO Count Matrix for Demultiplexing
4.6 years ago by fouerghi20 ▴ 90
0
votes
3
replies
2.2k
views
Creating HTO Count Matrix for Demultiplexing
single cell cell hashing cite seq
updated 4.6 years ago by ▴ 10 • written 4.6 years ago by ▴ 90
0
votes
0
replies
1.5k
views
Comment: C: Demultiplexing/ separating multiple hashtags in multi-modal sc-seq
4.6 years ago by fouerghi20 ▴ 90
0
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0
replies
2.2k
views
Comment: C: Creating HTO Count Matrix for Demultiplexing
4.6 years ago by fouerghi20 ▴ 90
2
votes
6
replies
4.9k
views
Algorithm to remove batch effects
single-cell batch-effect RNA-Seq
updated 17 months ago by 45k • written 4.7 years ago by ▴ 90
4
votes
1
reply
9.7k
views
Normalization before or after merging the samples in Seurat
single-cell seurat batch-effect
updated 17 months ago by 45k • written 4.7 years ago by ▴ 90
0
votes
0
replies
4.6k
views
Comment: C: Is it worth it to explore outside of Seurat?
4.7 years ago by fouerghi20 ▴ 90
14
votes
5
replies
4.6k
views
Is it worth it to explore outside of Seurat?
single cell seurat
updated 4.2 years ago by ▴ 60 • written 4.7 years ago by ▴ 90
1
vote
2
replies
4.5k
views
Duplicated row names on Seurat
CCLE Seurat scRNAseq single cell
updated 4.8 years ago by 20 • written 4.8 years ago by ▴ 90
0
votes
5
replies
5.5k
views
Labeling Clusters in ggplot
ggplot single cell
updated 3.8 years ago by • 0 • written 4.8 years ago by ▴ 90
0
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0
replies
5.5k
views
Answer: A: Labeling Clusters in ggplot
4.8 years ago by fouerghi20 ▴ 90
0
votes
0
replies
1.2k
views
FeaturePlot on a KDE Plot/density plot
single cell seurat r RNA-Seq
4.8 years ago by fouerghi20 ▴ 90
0
votes
0
replies
943
views
Error when running ssGSEA
GSEA ssGSEA gene enrichment
4.8 years ago by fouerghi20 ▴ 90
0
votes
0
replies
4.5k
views
Comment: C: Duplicated row names on Seurat
4.8 years ago by fouerghi20 ▴ 90
0
votes
0
replies
1.5k
views
Comment: C: Seurat Integration Post-Normalization and Cluster Identification or Pre those St
4.9 years ago by fouerghi20 ▴ 90
0
votes
0
replies
6.9k
views
Comment: C: Finding Subclusters in Seurat Clusters
4.9 years ago by fouerghi20 ▴ 90
0
votes
1
reply
1.5k
views
Seurat Integration Post-Normalization and Cluster Identification or Pre those Steps
single cell seurat integration
4.9 years ago by fouerghi20 ▴ 90
11
votes
5
replies
6.9k
views
Finding Subclusters in Seurat Clusters
seurat scRNAseq cluster subcluster
updated 4.0 years ago by ▴ 190 • written 5.0 years ago by ▴ 90
0
votes
0
replies
2.4k
views
Comment: C: PHATE Clustering Error
5.0 years ago by fouerghi20 ▴ 90
0
votes
1
reply
2.4k
views
Comment: C: PHATE Clustering Error
5.0 years ago by fouerghi20 ▴ 90
0
votes
0
replies
2.4k
views
Comment: C: PHATE Clustering Error
5.0 years ago by fouerghi20 ▴ 90
0
votes
0
replies
2.4k
views
Comment: C: PHATE Clustering Error
updated 5.0 years ago by 154k • written 5.0 years ago by ▴ 90
0
votes
10
replies
2.4k
views
PHATE Clustering Error
PHATE scRNA-seq single cell seurat error
updated 5.0 years ago by 154k • written 5.0 years ago by ▴ 90
0
votes
2
replies
2.4k
views
Comment: C: PHATE Clustering Error
5.0 years ago by fouerghi20 ▴ 90
0
votes
2
replies
2.4k
views
Comment: A: PHATE Clustering Error
5.0 years ago by fouerghi20 ▴ 90
0
votes
1
reply
3.9k
views
Comment: C: Running PHATE on Seurat Object
5.0 years ago by fouerghi20 ▴ 90
2
votes
3
replies
3.9k
views
Running PHATE on Seurat Object
scRNAseq seurat PHATE
updated 5.0 years ago by ★ 19k • written 5.0 years ago by ▴ 90
0
votes
1
reply
1.6k
views
Comment: C: BCL2FASTQ2 Pipeline Errors
5.2 years ago by fouerghi20 ▴ 90
3
votes
3
replies
1.6k
views
BCL2FASTQ2 Pipeline Errors
RNA-Seq FASTQ BCL Illumina
updated 5.2 years ago by 16k • written 5.2 years ago by ▴ 90
2
votes
1
reply
1.9k
views
Generating A Heatmap for specific samples.
RNA-Seq DESeq2 Heatmap
updated 5.4 years ago by ▴ 30 • written 5.4 years ago by ▴ 90
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