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Comment: Comment: Fastq Screen shows many unmapped reads
4 months ago by esimonova.me ▴ 20
0
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2
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181
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Fastq Screen shows many unmapped reads
fastq_screen
4 months ago by esimonova.me ▴ 20
0
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0
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287
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conumee - adding bed file instead of sample detailed regions
conumee R rtracklayer
13 months ago by esimonova.me ▴ 20
2
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1
reply
353
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Immune repertoire reconstruction from RNA-seq data
TCR-seq
updated 15 months ago by ▴ 160 • written 15 months ago by ▴ 20
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0
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225
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Genome reference with haplotypes
reference haplotypes
15 months ago by esimonova.me ▴ 20
0
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1
reply
344
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Deconvolution/quantification of immune cell types in Macaca Mulatta
RNA-seq deconvolution
updated 15 months ago by • 0 • written 15 months ago by ▴ 20
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0
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2.1k
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Answer: Answer: Find Information about TCGA samples from GDC data portal
17 months ago by esimonova.me ▴ 20
8
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4
replies
1.6k
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RNASEQ - Mapping to genome or Transcriptome
mapping RNAseq
updated 17 months ago by ▴ 530 • written 17 months ago by ▴ 20
0
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0
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8.3k
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Comment: Comment: Matplotlib comprehensive chromosome drawing
18 months ago by esimonova.me ▴ 20
0
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1
reply
835
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Comment: Comment: Strand specific library
18 months ago by esimonova.me ▴ 20
3
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6
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835
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Strand specific library
htseq
updated 18 months ago by 3.4k • written 18 months ago by ▴ 20
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0
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835
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Comment: Comment: Strand specific library
18 months ago by esimonova.me ▴ 20
0
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0
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617
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mSINGs - pipeline
MSI
19 months ago by esimonova.me ▴ 20
0
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0
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296
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Freebayes - too many variants produced on WES sample
Freebayes
21 months ago by esimonova.me ▴ 20
0
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0
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313
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Simulated data or pseudoreplicatesreported in papers
pseudoreplicates SNPs INDELs
21 months ago by esimonova.me ▴ 20
0
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0
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335
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plink - generate VCF
plink
21 months ago by esimonova.me ▴ 20
0
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1
reply
475
views
Precision of variant calling (INDELs)
INDELs hap.py
updated 22 months ago by ▴ 270 • written 22 months ago by ▴ 20
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0
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324
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Validation of Bioinformatics pipeline with NA12763
BioinfoPipelineValidation NA12763
22 months ago by esimonova.me ▴ 20
0
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0
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385
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GATK VQSR filter
NA12878 VariantRecallibration
22 months ago by esimonova.me ▴ 20
0
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1
reply
492
views
Mendelian vs Inherited variants
inherited mendelian
updated 22 months ago by ★ 2.9k • written 22 months ago by ▴ 20
0
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1
reply
641
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Effective subsampling of BAMs
BAM sampling
updated 23 months ago by 68k • written 23 months ago by ▴ 20
0
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1
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609
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How many INDELs and SNPs should I expect in vcf file and what the best parameters to filter false positives?
variants WES WGS
updated 23 months ago by 23k • written 23 months ago by ▴ 20
2
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1
reply
457
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BAM FLAG mate unmappedand mate reverse strand
BAM
updated 23 months ago by 16k • written 23 months ago by ▴ 20
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0
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2.7k
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Answer: A: BED intersects/overlaps output for Venn diagrams - single column
2.3 years ago by esimonova.me ▴ 20
0
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1
reply
443
views
Difference between Amlicon and Enrichment libraries
next-gen
updated 2.3 years ago by 13k • written 2.3 years ago by ▴ 20
0
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0
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553
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Error running Genomic Vis vcf.venn(vcf.files, 'GRCh38', sample.names)
GenomicVis
2.5 years ago by esimonova.me ▴ 20
26 results • Page 1 of 1
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