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2
replies
890
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scRNAseq: integration downstream analysis and identification genes altered in one condition
scRNAseq R integration
updated 2.3 years ago by 45k • written 2.3 years ago by ▴ 160
6
votes
2
replies
1.5k
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scRNAseq error source a custom function
R scRNA-seq
updated 2.3 years ago by 3.3k • written 2.3 years ago by ▴ 160
3
votes
6
replies
2.4k
views
How to get information about promoter from bulk-RNAseq?
promoter R RNA-seq
updated 2.4 years ago by ★ 1.7k • written 2.4 years ago by ▴ 160
0
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0
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2.4k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
2.4 years ago by camillab. ▴ 160
0
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0
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2.4k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
2.4 years ago by camillab. ▴ 160
8
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4
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2.4k
views
R ggrepel for overlapping text in the whole plot
overlapping r ggrepel ggplot
updated 2.5 years ago by ★ 1.9k • written 2.5 years ago by ▴ 160
0
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0
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2.4k
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Comment: Comment: R ggrepel for overlapping text in the whole plot
2.5 years ago by camillab. ▴ 160
0
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1
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2.1k
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Comment: Comment: ORA analysis (over-representation analysis) : different package different padjus
2.6 years ago by camillab. ▴ 160
9
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5
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2.1k
views
6 follow
ORA analysis (over-representation analysis) : different package different padjusted and qvalue
r p-value ORA q-value
updated 2.5 years ago by ▴ 20 • written 2.6 years ago by ▴ 160
4
votes
2
replies
2.5k
views
specificy ggrepel which genes not overlap in a scatterplot
R ggplot2 ggrepel
updated 3.5 years ago by 5.1k • written 3.5 years ago by ▴ 160
0
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0
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8.8k
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Comment: Comment: Retrieve Clusters From ComplexHeatmap
3.7 years ago by camillab. ▴ 160
0
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1
reply
8.8k
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Comment: Comment: Retrieve Clusters From ComplexHeatmap
3.7 years ago by camillab. ▴ 160
0
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1
reply
8.8k
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Comment: Comment: Retrieve Clusters From ComplexHeatmap
3.7 years ago by camillab. ▴ 160
1
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2
replies
1.4k
views
Plot genes derived from time course experiment as line graph
line RNAseq ggplot R
updated 4.0 years ago by ▴ 220 • written 4.1 years ago by ▴ 160
0
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0
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12k
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Comment: Comment: How to change the default font in ggplot 2
4.2 years ago by camillab. ▴ 160
0
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1
reply
12k
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Comment: Comment: How to change the default font in ggplot 2
4.2 years ago by camillab. ▴ 160
0
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1
reply
12k
views
Comment: Comment: How to change the default font in ggplot 2
4.2 years ago by camillab. ▴ 160
0
votes
6
replies
12k
views
How to change the default font in ggplot 2
font ggplot2 Arial
4.2 years ago by camillab. ▴ 160
4
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3
replies
2.5k
views
Scatterplot ggplot: too many overlapping point make an area magnified/ increase specific areas
overlapping ggplot scatterplot r
updated 4.5 years ago by 21k • written 4.5 years ago by ▴ 160
0
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1
reply
2.9k
views
Comment: Comment: Loading PCA - different value depending on the package used
4.5 years ago by camillab. ▴ 160
0
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1
reply
2.9k
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Comment: Comment: Loading PCA - different value depending on the package used
4.5 years ago by camillab. ▴ 160
0
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1
reply
2.9k
views
Comment: Comment: Loading PCA - different value depending on the package used
4.5 years ago by camillab. ▴ 160
5
votes
8
replies
2.9k
views
Loading PCA - different value depending on the package used
factormineR PCAtools pca prcomp loadings
updated 4.5 years ago by 89k • written 4.5 years ago by ▴ 160
1
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1
reply
1.6k
views
Reactome website gene expression analysis
gene_expression_analysis_tool Reactome_website
updated 4.5 years ago by 154k • written 4.5 years ago by ▴ 160
0
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1
reply
3.2k
views
Comment: Comment: How to do the gene ontology analysis for the list of genes
4.6 years ago by camillab. ▴ 160
0
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1
reply
2.9k
views
Comment: C: Covariate correction which data take for downstream analysis?
4.7 years ago by camillab. ▴ 160
3
votes
6
replies
2.9k
views
Covariate correction which data take for downstream analysis?
R linear-regression residual fitted-values
updated 4.0 years ago by ▴ 220 • written 4.7 years ago by ▴ 160
0
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0
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2.9k
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Comment: C: Covariate correction which data take for downstream analysis?
4.7 years ago by camillab. ▴ 160
0
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1
reply
4.2k
views
Comment: C: Error in y - mu : non-numeric argument to binary operator - linear regression lo
4.7 years ago by camillab. ▴ 160
3
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3
replies
4.2k
views
Error in y - mu : non-numeric argument to binary operator - linear regression loop
bulkRNAseq R linear regression
updated 4.7 years ago by ★ 4.8k • written 4.7 years ago by ▴ 160
0
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1
reply
8.2k
views
Comment: C: Adjusting for confounding variables in RNA-SEQ Differential Expression Analysis
4.7 years ago by camillab. ▴ 160
0
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1
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8.2k
views
Comment: C: Adjusting for confounding variables in RNA-SEQ Differential Expression Analysis
4.7 years ago by camillab. ▴ 160
3
votes
1
reply
2.0k
views
Error on Linear regression bulkRNAseq
R linear regression residue
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 160
2
votes
3
replies
1.9k
views
NO FDR <0.05 in the whole dataset
R RNA-Seq FDR qvalue
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 160
0
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0
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1.9k
views
Comment: C: NO FDR <0.05 in the whole dataset
4.7 years ago by camillab. ▴ 160
1
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1
reply
11k
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Comment: C: p.adjusted p value
4.7 years ago by camillab. ▴ 160
0
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1
reply
11k
views
Comment: C: p.adjusted p value
4.7 years ago by camillab. ▴ 160
0
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0
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11k
views
Comment: C: p.adjusted p value
4.7 years ago by camillab. ▴ 160
0
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1
reply
11k
views
Comment: C: p.adjusted p value
4.7 years ago by camillab. ▴ 160
4
votes
9
replies
11k
views
p.adjusted p value
r pvalue FDR RNA-Seq
updated 4.7 years ago by 89k • written 4.7 years ago by ▴ 160
0
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1
reply
1.9k
views
Comment: C: PCA - untreated sample cluster separated
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 160
0
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1
reply
1.9k
views
Comment: C: PCA - untreated sample cluster separated
4.7 years ago by camillab. ▴ 160
0
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1
reply
1.9k
views
Comment: C: PCA - untreated sample cluster separated
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 160
1
vote
8
replies
1.9k
views
PCA - untreated sample cluster separated
R bulk-RNAseq PCA variability
4.7 years ago by camillab. ▴ 160
13
votes
13
replies
83k
views
pheatmap: Error in hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 10)
R RNA-Seq pheatmap arg10
updated 4.8 years ago by ▴ 50 • written 5.3 years ago by ▴ 160
0
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1
reply
1.9k
views
Comment: C: Volcano plot with highlighted significantly up/down regulated genes with specifi
5.0 years ago by camillab. ▴ 160
0
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1
reply
1.9k
views
Comment: C: Volcano plot with highlighted significantly up/down regulated genes with specifi
5.0 years ago by camillab. ▴ 160
3
votes
6
replies
1.9k
views
Volcano plot with highlighted significantly up/down regulated genes with specific normalised reads value?
R RNA-Seq EnhancedVolcano plot
5.0 years ago by camillab. ▴ 160
4
votes
1
reply
5.2k
views
Gene enrichment analysis clusterProfiler
RNA-Seq R clusterProfiler GSEA
updated 5.0 years ago by ▴ 60 • written 5.1 years ago by ▴ 160
0
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0
replies
1.6k
views
Comment: C: Big dataset how to plot gene expression differences?
5.0 years ago by camillab. ▴ 160
159 results • Page 2 of 4
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