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2
replies
488
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scRNAseq: integration downstream analysis and identification genes altered in one condition
scRNAseq R integration
updated 9 months ago by 43k • written 9 months ago by ▴ 160
6
votes
2
replies
650
views
scRNAseq error source a custom function
R scRNA-seq
updated 9 months ago by 3.2k • written 9 months ago by ▴ 160
3
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6
replies
1.1k
views
How to get information about promoter from bulk-RNAseq?
promoter R RNA-seq
updated 10 months ago by ▴ 900 • written 10 months ago by ▴ 160
0
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0
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1.1k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
10 months ago by camillab. ▴ 160
0
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0
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1.1k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
10 months ago by camillab. ▴ 160
8
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4
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1.0k
views
R ggrepel for overlapping text in the whole plot
overlapping r ggrepel ggplot
updated 12 months ago by ★ 1.7k • written 12 months ago by ▴ 160
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0
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1.0k
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Comment: Comment: R ggrepel for overlapping text in the whole plot
12 months ago by camillab. ▴ 160
0
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1
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1.2k
views
Comment: Comment: ORA analysis (over-representation analysis) : different package different padjus
13 months ago by camillab. ▴ 160
9
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5
replies
1.2k
views
6 follow
ORA analysis (over-representation analysis) : different package different padjusted and qvalue
r p-value ORA q-value
updated 12 months ago by ▴ 20 • written 13 months ago by ▴ 160
4
votes
2
replies
1.4k
views
specificy ggrepel which genes not overlap in a scatterplot
R ggplot2 ggrepel
updated 2.0 years ago by 4.6k • written 2.0 years ago by ▴ 160
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0
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6.4k
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Comment: Comment: Retrieve Clusters From ComplexHeatmap
2.2 years ago by camillab. ▴ 160
0
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1
reply
6.4k
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Comment: Comment: Retrieve Clusters From ComplexHeatmap
2.2 years ago by camillab. ▴ 160
0
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1
reply
6.4k
views
Comment: Comment: Retrieve Clusters From ComplexHeatmap
2.2 years ago by camillab. ▴ 160
1
vote
2
replies
882
views
Plot genes derived from time course experiment as line graph
line RNAseq ggplot R
updated 2.5 years ago by ▴ 140 • written 2.6 years ago by ▴ 160
0
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0
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6.8k
views
Comment: Comment: How to change the default font in ggplot 2
2.7 years ago by camillab. ▴ 160
0
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1
reply
6.8k
views
Comment: Comment: How to change the default font in ggplot 2
2.7 years ago by camillab. ▴ 160
0
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1
reply
6.8k
views
Comment: Comment: How to change the default font in ggplot 2
2.7 years ago by camillab. ▴ 160
0
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6
replies
6.8k
views
How to change the default font in ggplot 2
font ggplot2 Arial
2.7 years ago by camillab. ▴ 160
4
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3
replies
1.6k
views
Scatterplot ggplot: too many overlapping point make an area magnified/ increase specific areas
overlapping ggplot scatterplot r
updated 3.0 years ago by 21k • written 3.0 years ago by ▴ 160
0
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1
reply
1.9k
views
Comment: Comment: Loading PCA - different value depending on the package used
3.0 years ago by camillab. ▴ 160
0
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1
reply
1.9k
views
Comment: Comment: Loading PCA - different value depending on the package used
3.0 years ago by camillab. ▴ 160
0
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1
reply
1.9k
views
Comment: Comment: Loading PCA - different value depending on the package used
3.0 years ago by camillab. ▴ 160
5
votes
8
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1.9k
views
Loading PCA - different value depending on the package used
factormineR PCAtools pca prcomp loadings
updated 3.0 years ago by 87k • written 3.0 years ago by ▴ 160
1
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1
reply
1.2k
views
Reactome website gene expression analysis
gene_expression_analysis_tool Reactome_website
updated 3.0 years ago by 141k • written 3.0 years ago by ▴ 160
0
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1
reply
2.2k
views
Comment: Comment: How to do the gene ontology analysis for the list of genes
3.1 years ago by camillab. ▴ 160
0
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1
reply
1.5k
views
Comment: C: Covariate correction which data take for downstream analysis?
3.1 years ago by camillab. ▴ 160
3
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6
replies
1.5k
views
Covariate correction which data take for downstream analysis?
R linear-regression residual fitted-values
updated 2.5 years ago by ▴ 210 • written 3.1 years ago by ▴ 160
0
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0
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1.5k
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Comment: C: Covariate correction which data take for downstream analysis?
3.1 years ago by camillab. ▴ 160
0
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1
reply
3.2k
views
Comment: C: Error in y - mu : non-numeric argument to binary operator - linear regression lo
3.2 years ago by camillab. ▴ 160
3
votes
3
replies
3.2k
views
Error in y - mu : non-numeric argument to binary operator - linear regression loop
bulkRNAseq R linear regression
updated 3.2 years ago by ★ 4.7k • written 3.2 years ago by ▴ 160
0
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1
reply
6.4k
views
Comment: C: Adjusting for confounding variables in RNA-SEQ Differential Expression Analysis
3.2 years ago by camillab. ▴ 160
0
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1
reply
6.4k
views
Comment: C: Adjusting for confounding variables in RNA-SEQ Differential Expression Analysis
3.2 years ago by camillab. ▴ 160
3
votes
1
reply
1.5k
views
Error on Linear regression bulkRNAseq
R linear regression residue
updated 3.2 years ago by 13k • written 3.2 years ago by ▴ 160
2
votes
3
replies
1.2k
views
NO FDR <0.05 in the whole dataset
R RNA-Seq FDR qvalue
updated 3.2 years ago by 13k • written 3.2 years ago by ▴ 160
0
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0
replies
1.2k
views
Comment: C: NO FDR <0.05 in the whole dataset
3.2 years ago by camillab. ▴ 160
1
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1
reply
7.9k
views
Comment: C: p.adjusted p value
3.2 years ago by camillab. ▴ 160
0
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1
reply
7.9k
views
Comment: C: p.adjusted p value
3.2 years ago by camillab. ▴ 160
0
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0
replies
7.9k
views
Comment: C: p.adjusted p value
3.2 years ago by camillab. ▴ 160
0
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1
reply
7.9k
views
Comment: C: p.adjusted p value
3.2 years ago by camillab. ▴ 160
4
votes
9
replies
7.9k
views
p.adjusted p value
r pvalue FDR RNA-Seq
updated 3.2 years ago by 82k • written 3.2 years ago by ▴ 160
0
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1
reply
1.0k
views
Comment: C: PCA - untreated sample cluster separated
updated 3.2 years ago by 13k • written 3.2 years ago by ▴ 160
0
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1
reply
1.0k
views
Comment: C: PCA - untreated sample cluster separated
3.2 years ago by camillab. ▴ 160
0
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1
reply
1.0k
views
Comment: C: PCA - untreated sample cluster separated
updated 3.2 years ago by 13k • written 3.2 years ago by ▴ 160
1
vote
8
replies
1.0k
views
PCA - untreated sample cluster separated
R bulk-RNAseq PCA variability
3.2 years ago by camillab. ▴ 160
13
votes
13
replies
65k
views
pheatmap: Error in hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 10)
R RNA-Seq pheatmap arg10
updated 3.3 years ago by ▴ 40 • written 3.8 years ago by ▴ 160
0
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1
reply
1.3k
views
Comment: C: Volcano plot with highlighted significantly up/down regulated genes with specifi
3.5 years ago by camillab. ▴ 160
0
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1
reply
1.3k
views
Comment: C: Volcano plot with highlighted significantly up/down regulated genes with specifi
3.5 years ago by camillab. ▴ 160
3
votes
6
replies
1.3k
views
Volcano plot with highlighted significantly up/down regulated genes with specific normalised reads value?
R RNA-Seq EnhancedVolcano plot
3.5 years ago by camillab. ▴ 160
4
votes
1
reply
2.8k
views
Gene enrichment analysis clusterProfiler
RNA-Seq R clusterProfiler GSEA
updated 3.5 years ago by ▴ 50 • written 3.6 years ago by ▴ 160
0
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0
replies
984
views
Comment: C: Big dataset how to plot gene expression differences?
3.5 years ago by camillab. ▴ 160
159 results • Page 2 of 4
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