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How do I filter based on variant allelle frequency in GATK HaplotypeCaller VCF
SNP indels RNA-Seq
3.7 years ago by danson.wooi • 0
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0
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654
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How take advantage of ERCC spike-ins to improve variant calling
SNP RNA-Seq indel
3.7 years ago by danson.wooi • 0
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1
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1.9k
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GATK for RNA seq variant calling
RNA-Seq snp variant calling
3.7 years ago by danson.wooi • 0
0
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1
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672
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How do I find the network path for the interaction of 2 genes
RNA-Seq transcriptomics gene network
updated 3.7 years ago by 87k • written 3.7 years ago by • 0
2
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2
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835
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Is it better to use a merged transcriptome or the reference annotation for RSEM gene expression
rsem gene_expression RNA-Seq
updated 3.7 years ago by 14k • written 3.7 years ago by • 0
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743
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How to find out the domains encoded by each exon and predict gene isoform role/function?
RNA-Seq genome isoforms genes splicing
updated 3.7 years ago by ★ 1.9k • written 3.7 years ago by • 0
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658
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GSEA and pathway analysis on a small subset of genes
GSEA KEGG RNA-Seq targeted-rna-seq microarray
3.7 years ago by danson.wooi • 0
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0
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748
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Comment: C: Is it feasible to look for mutations in RNA-seq data from FFPE samples?
3.7 years ago by danson.wooi • 0
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1
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748
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Comment: C: Is it feasible to look for mutations in RNA-seq data from FFPE samples?
3.7 years ago by danson.wooi • 0
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4
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748
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Is it feasible to look for mutations in RNA-seq data from FFPE samples?
RNA-Seq SNP gene R
3.7 years ago by danson.wooi • 0
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