Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
2
replies
2.1k
views
SnpSift: Annotate vcf file using GNOMAD
GNOMAD SnpEff SnpSift
updated 28 days ago by 39k • written 2.1 years ago by ▴ 230
6
votes
3
replies
1.9k
views
Visualize pileup data
pileup gfp
updated 18 months ago by ▴ 130 • written 2.6 years ago by ▴ 230
0
votes
0
replies
1.1k
views
Comment: Comment: Seurat - setting random seed for FindNeighbors, FindClusters
2.1 years ago by bsmith030465 ▴ 230
0
votes
1
reply
1.1k
views
Seurat - setting random seed for FindNeighbors, FindClusters
seurat clustree
2.1 years ago by bsmith030465 ▴ 230
1
vote
1
reply
1.1k
views
Annotate vcf with AF, gene symbol, functional information
vcf gnomad snpeff dbsnp
updated 2.1 years ago by ▴ 810 • written 2.1 years ago by ▴ 230
0
votes
0
replies
1.0k
views
Comment: C: scRNA: subset a small number of fastq reads
2.6 years ago by bsmith030465 ▴ 230
0
votes
1
reply
1.0k
views
Comment: C: scRNA: subset a small number of fastq reads
2.6 years ago by bsmith030465 ▴ 230
0
votes
5
replies
1.0k
views
scRNA: subset a small number of fastq reads
scrna fastq cellranger 10x
2.6 years ago by bsmith030465 ▴ 230
5
votes
7
replies
41k
views
PLINK: merge .bed files
plink
updated 5 months ago by 39k • written 7.9 years ago by ▴ 230
0
votes
1
reply
1.0k
views
Comment: C: Visualizing gene variants (gviz)
2.7 years ago by bsmith030465 ▴ 230
0
votes
3
replies
1.0k
views
Visualizing gene variants (gviz)
gviz SNP
2.7 years ago by bsmith030465 ▴ 230
3
votes
4
replies
1.5k
views
Cellranger: BCR analysis
cellranger scrna bcr
updated 2.8 years ago by ★ 1.4k • written 2.8 years ago by ▴ 230
8
votes
5
replies
3.9k
views
gnomAD: query utilitites
gnomAD
updated 2.9 years ago by ▴ 20 • written 4.1 years ago by ▴ 230
3
votes
3
replies
1.0k
views
Split Fastq files
fastq illumina
3.6 years ago by bsmith030465 ▴ 230
0
votes
1
reply
41k
views
Comment: C: PLINK: merge .bed files
updated 3.6 years ago by 39k • written 7.9 years ago by ▴ 230
0
votes
1
reply
1.4k
views
Comment: C: scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
3.7 years ago by bsmith030465 ▴ 230
2
votes
5
replies
1.4k
views
scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
scRNA-seq RNA-Seq kallisto bioproject fastq-dump
3.7 years ago by bsmith030465 ▴ 230
0
votes
1
reply
1.4k
views
Comment: C: scRNA-seq: Kallisto processing of bioproject data
3.7 years ago by bsmith030465 ▴ 230
0
votes
0
replies
755
views
Comment: C: PLINK : Error: --tdt requires a case/control phenotype.
3.8 years ago by bsmith030465 ▴ 230
3
votes
2
replies
755
views
PLINK : Error: --tdt requires a case/control phenotype.
PLINK
updated 3.8 years ago by 10k • written 3.8 years ago by ▴ 230
0
votes
1
reply
2.7k
views
PLINK - error in --make-bed
plink
updated 4.0 years ago by 10k • written 4.0 years ago by ▴ 230
0
votes
0
replies
5.0k
views
Comment: C: PLINK: filter for indels
4.1 years ago by bsmith030465 ▴ 230
3
votes
7
replies
5.0k
views
PLINK: filter for indels
plink
updated 4.1 years ago by 11k • written 4.1 years ago by ▴ 230
0
votes
1
reply
5.0k
views
Comment: C: PLINK: filter for indels
4.1 years ago by bsmith030465 ▴ 230
0
votes
1
reply
5.0k
views
Comment: C: PLINK: filter for indels
4.1 years ago by bsmith030465 ▴ 230
12
votes
1
reply
7.5k
views
PLINK: Error: Invalid chromosome code 'chr11_KI0721v1_random'
PLINK VCF
updated 4.2 years ago by 10k • written 4.2 years ago by ▴ 230
5
votes
5
replies
6.9k
views
PLINK: Change affection status
plink
updated 5 months ago by 39k • written 7.9 years ago by ▴ 230
0
votes
0
replies
5.2k
views
Comment: C: samtools fastq compression
4.7 years ago by bsmith030465 ▴ 230
2
votes
3
replies
5.2k
views
samtools fastq compression
samtools fastq cram
updated 4.7 years ago by ★ 1.3k • written 4.7 years ago by ▴ 230
0
votes
1
reply
3.1k
views
Comment: C: bcftools: DP filter based on chromosome and sex
4.7 years ago by bsmith030465 ▴ 230
1
vote
3
replies
3.1k
views
bcftools: DP filter based on chromosome and sex
bcftools wgs samtools vcftools pyvcf
updated 4.7 years ago by 154k • written 4.7 years ago by ▴ 230
0
votes
1
reply
3.1k
views
Comment: C: bcftools filtering error
4.8 years ago by bsmith030465 ▴ 230
0
votes
1
reply
3.1k
views
Comment: C: bcftools filtering error
4.8 years ago by bsmith030465 ▴ 230
1
vote
7
replies
3.1k
views
bcftools filtering error
next-gen samtools bcftools
4.8 years ago by bsmith030465 ▴ 230
3
votes
4
replies
9.9k
views
PLINK format to EIGENSTRAT format
plink eigenstrat
updated 17 months ago by 39k • written 8.7 years ago by ▴ 230
2
votes
4
replies
6.5k
views
plink: vcf to ped
sequencing snp PLINK
updated 5.1 years ago by 10k • written 5.1 years ago by ▴ 230
1
vote
0
replies
916
views
Rsamtools: error with quickBamFlagSummary
Rsamtools RNA-Seq
5.5 years ago by bsmith030465 ▴ 230
0
votes
0
replies
3.4k
views
Comment: C: Adjust for covariates
5.5 years ago by bsmith030465 ▴ 230
0
votes
0
replies
3.4k
views
Comment: C: Adjust for covariates
5.5 years ago by bsmith030465 ▴ 230
3
votes
5
replies
3.4k
views
Adjust for covariates
gene expression
5.5 years ago by bsmith030465 ▴ 230
0
votes
0
replies
6.8k
views
Comment: C: error on installing samtools on linux cluster
6.2 years ago by bsmith030465 ▴ 230
4
votes
7
replies
6.8k
views
error on installing samtools on linux cluster
samtools
6.2 years ago by bsmith030465 ▴ 230
0
votes
0
replies
6.8k
views
Answer: A: error on installing samtools on linux cluster
6.2 years ago by bsmith030465 ▴ 230
1
vote
1
reply
4.5k
views
Gviz data track - how to color points, add horizontal line?
Gviz
updated 6.8 years ago by 47k • written 6.8 years ago by ▴ 230
2
votes
1
reply
3.8k
views
Homo.sapiens - hg38 build?
Homo.sapiens OrganismDbi
updated 6.9 years ago by 47k • written 6.9 years ago by ▴ 230
0
votes
0
replies
2.3k
views
Comment: C: Gviz - creating geneModel object
6.9 years ago by bsmith030465 ▴ 230
0
votes
2
replies
2.3k
views
Gviz - creating geneModel object
Gviz
6.9 years ago by bsmith030465 ▴ 230
4
votes
3
replies
14k
views
GRanges intersect operation
GRanges
6.9 years ago by bsmith030465 ▴ 230
0
votes
1
reply
14k
views
Answer: A: GRanges intersect operation
6.9 years ago by bsmith030465 ▴ 230
12
votes
13
replies
12k
views
6 follow
How To Determine The Statistical Significance Of Overlap (Intersect) Between Three Sets
statistics r
updated 6.9 years ago by 20 • written 10.2 years ago by ▴ 230
70 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6