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MOFA2: Confidence Intervals // Unvertainty estimates for MOFA model
Biostatistics MOFA2
13 months ago by mario_de_manner ▴ 20
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1
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23k
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Comment: Comment: Enrichment Analysis, Clustering and Scoring with pathfindR
updated 3.4 years ago by 45k • written 3.4 years ago by ▴ 20
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2.5k
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Comment: Comment: RNAseq: Filtering before or after transformation?
3.4 years ago by mario_de_manner ▴ 20
6
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5
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2.5k
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RNAseq: Filtering before or after transformation?
DESeq2 transformation RNAseq filtering
updated 3.4 years ago by 90k • written 3.4 years ago by ▴ 20
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1
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2.5k
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Comment: Comment: RNAseq: Filtering before or after transformation?
3.4 years ago by mario_de_manner ▴ 20
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1
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16k
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Comment: Comment: Normalization Of Rna Sequencing Counts (By Ercc / Gene Length)
updated 2.8 years ago by 45k • written 3.5 years ago by ▴ 20
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0
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943
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Comment: Comment: TopHat2 to align RNA with or without annotation file
3.5 years ago by mario_de_manner ▴ 20
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2
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943
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TopHat2 to align RNA with or without annotation file
RNAseq GFF GTF TopHat2
3.5 years ago by mario_de_manner ▴ 20
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1
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2.3k
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Comment: Comment: How to extract reads that map exclusively to a single site with 1 or zero mismat
3.5 years ago by mario_de_manner ▴ 20
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0
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2.3k
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Comment: Comment: How to extract reads that map exclusively to a single site with 1 or zero mismat
3.5 years ago by mario_de_manner ▴ 20
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1
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2.3k
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Comment: Comment: How to extract reads that map exclusively to a single site with 1 or zero mismat
3.5 years ago by mario_de_manner ▴ 20
2
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6
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2.3k
views
How to extract reads that map exclusively to a single site with 1 or zero mismatches from BAM files
RNAseq Samtools
updated 3.5 years ago by 103k • written 3.5 years ago by ▴ 20
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0
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698
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HTSeq-count: proper pairs in bam file
BWA -count RNAseq HTseq
3.5 years ago by mario_de_manner ▴ 20
3
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2
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1.3k
views
How to filter for evalue threshold in blastx output
bash blastx
updated 3.7 years ago by ★ 2.5k • written 3.7 years ago by ▴ 20
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0
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2.9k
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Comment: Comment: Any idea about extracting bacteria related proteins(or protein clusters) from un
3.7 years ago by mario_de_manner ▴ 20
0
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0
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703
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Search group specific genes in presence/absence matrix of pangenome
R statistics binary microbiome pangenome
3.8 years ago by mario_de_manner ▴ 20
4
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3
replies
4.3k
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Downsampling fastq reads
next-gen metagenomics
updated 4.7 years ago by ▴ 330 • written 4.8 years ago by ▴ 20
0
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1
reply
3.1k
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post-hoc (Tukey) on adonis (permanova)
R statistics
4.8 years ago by mario_de_manner ▴ 20
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0
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3.7k
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Comment: C: Extracting group-specific combinations from distance matrix
4.8 years ago by mario_de_manner ▴ 20
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1
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3.7k
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Comment: C: Extracting group-specific combinations from distance matrix
4.8 years ago by mario_de_manner ▴ 20
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0
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3.7k
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Comment: A: Extracting group-specific combinations from distance matrix
4.8 years ago by mario_de_manner ▴ 20
0
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1
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3.7k
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Comment: C: Extracting group-specific combinations from distance matrix
4.8 years ago by mario_de_manner ▴ 20
1
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7
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3.7k
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Extracting group-specific combinations from distance matrix
R
4.8 years ago by mario_de_manner ▴ 20
1
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1
reply
1.5k
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alpha diversity metrics for relative frequency data
R metagenomics statistics
4.8 years ago by mario_de_manner ▴ 20
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0
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1.3k
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Which diversity index for relative abundance data?
Statistics R metagenomics OTU phyloseq
4.8 years ago by mario_de_manner ▴ 20
0
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0
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783
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Can I apply log transformation on proportions in compositional microbiomic data
microbiome R selbal compositional data
4.9 years ago by mario_de_manner ▴ 20
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0
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1.0k
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How to normalize between samples in WGS metagenomics
Metagenomics shotgun metagenomics Normalization
5.2 years ago by mario_de_manner ▴ 20
1
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0
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2.4k
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Answer: A: How MetaPhlAn calculates relative abundance
5.2 years ago by mario_de_manner ▴ 20
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0
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3.3k
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Comment: C: what's meaning of parameter "-t rel_ab_w_read_stats"
5.2 years ago by mario_de_manner ▴ 20
2
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11
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5.4k
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Importing MetaPhlAn3 profile table into phyloseq to use decontam
software error R
5.2 years ago by mario_de_manner ▴ 20
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1
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5.4k
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Comment: A: Importing MetaPhlAn3 profile table into phyloseq to use decontam
5.2 years ago by mario_de_manner ▴ 20
1
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1
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1.8k
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Trimmomatic on NEBNext Ultra II FS DNA
Trimmomatic Adapters sequencing next-gen
5.3 years ago by mario_de_manner ▴ 20
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0
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2.5k
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Comment: C: Decontam data import (phyloseq?)
updated 5.3 years ago by 154k • written 5.3 years ago by ▴ 20
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1
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2.5k
views
Comment: A: Decontam data import (phyloseq?)
updated 5.3 years ago by 154k • written 5.3 years ago by ▴ 20
34 results • Page 1 of 1
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