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How can I build a ranks matrix on pre calculated fold changes with RankProd?
R Gene expressions RankProd Bioconductor
updated 5.3 years ago by ▴ 340 • written 7.3 years ago by ▴ 160
3
votes
3
replies
4.8k
views
How to extract specific columns from Drugbank xml file
Drugbank xml
updated 6.2 years ago by ▴ 20 • written 6.9 years ago by ▴ 160
0
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0
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4.8k
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Comment: C: How to extract specific columns from Drugbank xml file
6.9 years ago by vasilislenis ▴ 160
0
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0
replies
11k
views
Comment: Comment: Downloading and extracting DrugBank data using R
updated 2.7 years ago by 45k • written 6.9 years ago by ▴ 160
0
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1
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1.5k
views
Comment: C: baseline error distribution and missing values
7.0 years ago by vasilislenis ▴ 160
1
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3
replies
1.5k
views
baseline error distribution and missing values
gene expression LPE Transcriptomics
updated 7.0 years ago by 89k • written 7.0 years ago by ▴ 160
7
votes
8
replies
11k
views
More loose criteria for bowtie2 mapping
bowtie2 assembly mapping
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 160
0
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0
replies
2.5k
views
Comment: C: GO tools: no annotation file for my species
9.1 years ago by vasilislenis ▴ 160
0
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1
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2.5k
views
Comment: C: GO tools: no annotation file for my species
9.1 years ago by vasilislenis ▴ 160
0
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7
replies
2.5k
views
GO tools: no annotation file for my species
GO terms Ensembl
updated 9.1 years ago by 7.6k • written 9.1 years ago by ▴ 160
0
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0
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2.5k
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Comment: C: GO tools: no annotation file for my species
9.1 years ago by vasilislenis ▴ 160
1
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0
replies
4.0k
views
Comment: C: Question about the consequence types from VEP
9.2 years ago by vasilislenis ▴ 160
0
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1
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4.0k
views
Comment: C: Question about the consequence types from VEP
9.2 years ago by vasilislenis ▴ 160
6
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4
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4.0k
views
Question about the consequence types from VEP
VEP SNPs annotation Consequence types
updated 9.2 years ago by ★ 5.2k • written 9.2 years ago by ▴ 160
0
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1
reply
3.0k
views
Comment: C: Mugsy multiple alignment and core dumped
9.2 years ago by vasilislenis ▴ 160
0
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1
reply
3.0k
views
Comment: C: Mugsy multiple alignment and core dumped
9.2 years ago by vasilislenis ▴ 160
0
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6
replies
3.0k
views
Mugsy multiple alignment and core dumped
Mugsy whole-genomes multiple-alignment
updated 2.3 years ago by 45k • written 9.2 years ago by ▴ 160
0
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0
replies
3.5k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
9.2 years ago by vasilislenis ▴ 160
0
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1
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3.5k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
9.2 years ago by vasilislenis ▴ 160
0
votes
1
reply
3.5k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
9.2 years ago by vasilislenis ▴ 160
2
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6
replies
3.5k
views
How to split the sequences in multi fasta file in a specific length
FASTA FASPLIT
9.2 years ago by vasilislenis ▴ 160
0
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1
reply
2.7k
views
Comment: C: How can I change the reference genome in a multiple alignment (maf format)
9.8 years ago by vasilislenis ▴ 160
0
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3
replies
2.7k
views
How can I change the reference genome in a multiple alignment (maf format)
reference maf multiple-alignment
updated 3.1 years ago by 45k • written 9.8 years ago by ▴ 160
0
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0
replies
6.1k
views
Comment: Comment: vcf files and zygosity
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 160
0
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1
reply
6.1k
views
Comment: Comment: vcf files and zygosity
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 160
1
vote
4
replies
6.1k
views
vcf files and zygosity
freebayes variant-calling samtools
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 160
0
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0
replies
4.7k
views
Comment: Comment: Phylogenetic tree construction with RAxML and low bootstrap values
updated 2.6 years ago by 45k • written 10.3 years ago by ▴ 160
0
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1
reply
4.7k
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Comment: C: Phylogenetic tree construction with RAxML and low bootstrap values
10.3 years ago by vasilislenis ▴ 160
2
votes
5
replies
4.7k
views
Phylogenetic tree construction with RAxML and low bootstrap values
RAxML bootstrap Phylogenetic-tree
updated 2.6 years ago by 45k • written 10.3 years ago by ▴ 160
1
vote
1
reply
16k
views
Comment: Comment: Bootstrap values on a phylogenetic tree (RAxML).
updated 2.6 years ago by 45k • written 10.3 years ago by ▴ 160
4
votes
3
replies
16k
views
Bootstrap values on a phylogenetic tree (RAxML).
PAxML bootstrap phylogenetic-tree
updated 2.6 years ago by 45k • written 10.3 years ago by ▴ 160
0
votes
1
reply
2.8k
views
Problem With Phastcons
conservation multiple-alignment
updated 10.4 years ago by • 0 • written 12.1 years ago by ▴ 160
0
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0
replies
5.4k
views
Comment: Comment: Tba- Multiz Problem
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 160
1
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2
replies
5.4k
views
Tba- Multiz Problem
multiple-alignment
updated 3.2 years ago by 45k • written 11.8 years ago by ▴ 160
0
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0
replies
11k
views
Comment: C: More loose criteria for bowtie2 mapping
10.5 years ago by vasilislenis ▴ 160
0
votes
1
reply
11k
views
Comment: C: More loose criteria for bowtie2 mapping
10.5 years ago by vasilislenis ▴ 160
0
votes
0
replies
3.2k
views
Comment: Comment: Phylogenetic tree construction from mitochondrial SNPs
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 160
4
votes
3
replies
3.2k
views
Phylogenetic tree construction from mitochondrial SNPs
SNP phylogenetic-tree mitochondrial-genome
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 160
0
votes
1
reply
2.4k
views
psl alignment format and qstarts- qends calculation
pairwise-alignment psl whole-genome
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 160
0
votes
1
reply
6.4k
views
Comment: Comment: Blat Start And End Position Conventions
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 160
0
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0
replies
4.1k
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Comment: C: mitochondrial dna assembly comparison
10.8 years ago by vasilislenis ▴ 160
0
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1
reply
4.1k
views
Comment: Comment: mitochondrial dna assembly comparison
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
3
votes
4
replies
4.1k
views
mitochondrial dna assembly comparison
assembly mitochondria samtools consensus
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
0
votes
0
replies
11k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
0
votes
0
replies
11k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
0
votes
1
reply
11k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
0
votes
1
reply
11k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
7
votes
8
replies
11k
views
How to keep the header when I'm extracting a specific region from a bam file
sam mitochondria reference assembly bam
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 160
0
votes
0
replies
13k
views
Comment: Comment: bowtie2- running command problem
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 160
2
votes
2
replies
13k
views
bowtie2- running command problem
reference alignment bowtie2
updated 3.6 years ago by 45k • written 10.8 years ago by ▴ 160
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