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How can I build a ranks matrix on pre calculated fold changes with RankProd?
R Gene expressions RankProd Bioconductor
updated 3.9 years ago by ▴ 340 • written 5.9 years ago by ▴ 150
3
votes
3
replies
4.0k
views
How to extract specific columns from Drugbank xml file
Drugbank xml
updated 4.8 years ago by ▴ 20 • written 5.5 years ago by ▴ 150
0
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0
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4.0k
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Comment: C: How to extract specific columns from Drugbank xml file
5.5 years ago by vasilislenis ▴ 150
0
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0
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9.7k
views
Comment: Comment: Downloading and extracting DrugBank data using R
updated 15 months ago by 43k • written 5.5 years ago by ▴ 150
0
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1
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1.1k
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Comment: C: baseline error distribution and missing values
5.6 years ago by vasilislenis ▴ 150
1
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3
replies
1.1k
views
baseline error distribution and missing values
gene expression LPE Transcriptomics
updated 5.6 years ago by 87k • written 5.6 years ago by ▴ 150
7
votes
8
replies
9.7k
views
More loose criteria for bowtie2 mapping
bowtie2 assembly mapping
updated 23 months ago by 43k • written 9.1 years ago by ▴ 150
0
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0
replies
1.9k
views
Comment: C: GO tools: no annotation file for my species
7.7 years ago by vasilislenis ▴ 150
0
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1
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1.9k
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Comment: C: GO tools: no annotation file for my species
7.7 years ago by vasilislenis ▴ 150
0
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7
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1.9k
views
GO tools: no annotation file for my species
GO terms Ensembl
updated 7.7 years ago by 7.5k • written 7.7 years ago by ▴ 150
0
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0
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1.9k
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Comment: C: GO tools: no annotation file for my species
7.7 years ago by vasilislenis ▴ 150
1
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0
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3.2k
views
Comment: C: Question about the consequence types from VEP
7.8 years ago by vasilislenis ▴ 150
0
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1
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3.2k
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Comment: C: Question about the consequence types from VEP
7.8 years ago by vasilislenis ▴ 150
6
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4
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3.2k
views
Question about the consequence types from VEP
VEP SNPs annotation Consequence types
updated 7.8 years ago by ★ 5.2k • written 7.8 years ago by ▴ 150
0
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1
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2.4k
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Comment: C: Mugsy multiple alignment and core dumped
7.8 years ago by vasilislenis ▴ 150
0
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1
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2.4k
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Comment: C: Mugsy multiple alignment and core dumped
7.8 years ago by vasilislenis ▴ 150
0
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6
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2.4k
views
Mugsy multiple alignment and core dumped
Mugsy whole-genomes multiple-alignment
updated 11 months ago by 43k • written 7.8 years ago by ▴ 150
0
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0
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3.0k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
7.8 years ago by vasilislenis ▴ 150
0
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1
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3.0k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
7.8 years ago by vasilislenis ▴ 150
0
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1
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3.0k
views
Comment: C: How to split the sequences in multi fasta file in a specific length
7.8 years ago by vasilislenis ▴ 150
2
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6
replies
3.0k
views
How to split the sequences in multi fasta file in a specific length
FASTA FASPLIT
7.8 years ago by vasilislenis ▴ 150
0
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1
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2.2k
views
Comment: C: How can I change the reference genome in a multiple alignment (maf format)
8.4 years ago by vasilislenis ▴ 150
0
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3
replies
2.2k
views
How can I change the reference genome in a multiple alignment (maf format)
reference maf multiple-alignment
updated 20 months ago by 43k • written 8.4 years ago by ▴ 150
0
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0
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5.4k
views
Comment: Comment: vcf files and zygosity
updated 16 months ago by 43k • written 8.9 years ago by ▴ 150
0
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1
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5.4k
views
Comment: Comment: vcf files and zygosity
updated 16 months ago by 43k • written 8.9 years ago by ▴ 150
1
vote
4
replies
5.4k
views
vcf files and zygosity
freebayes variant-calling samtools
updated 16 months ago by 43k • written 8.9 years ago by ▴ 150
0
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0
replies
3.9k
views
Comment: Comment: Phylogenetic tree construction with RAxML and low bootstrap values
updated 15 months ago by 43k • written 8.9 years ago by ▴ 150
0
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1
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3.9k
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Comment: C: Phylogenetic tree construction with RAxML and low bootstrap values
8.9 years ago by vasilislenis ▴ 150
2
votes
5
replies
3.9k
views
Phylogenetic tree construction with RAxML and low bootstrap values
RAxML bootstrap Phylogenetic-tree
updated 15 months ago by 43k • written 8.9 years ago by ▴ 150
0
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1
reply
15k
views
Comment: Comment: Bootstrap values on a phylogenetic tree (RAxML).
updated 14 months ago by 43k • written 8.9 years ago by ▴ 150
2
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3
replies
15k
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Bootstrap values on a phylogenetic tree (RAxML).
PAxML bootstrap phylogenetic-tree
updated 14 months ago by 43k • written 9.0 years ago by ▴ 150
0
votes
1
reply
2.5k
views
Problem With Phastcons
conservation multiple-alignment
updated 9.0 years ago by • 0 • written 10.7 years ago by ▴ 150
0
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0
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4.9k
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Comment: Comment: Tba- Multiz Problem
updated 22 months ago by 43k • written 9.0 years ago by ▴ 150
1
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2
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4.9k
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Tba- Multiz Problem
multiple-alignment
updated 22 months ago by 43k • written 10.4 years ago by ▴ 150
0
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0
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9.7k
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Comment: C: More loose criteria for bowtie2 mapping
9.1 years ago by vasilislenis ▴ 150
0
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1
reply
9.7k
views
Comment: C: More loose criteria for bowtie2 mapping
9.1 years ago by vasilislenis ▴ 150
0
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0
replies
2.8k
views
Comment: Comment: Phylogenetic tree construction from mitochondrial SNPs
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 150
4
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3
replies
2.8k
views
Phylogenetic tree construction from mitochondrial SNPs
SNP phylogenetic-tree mitochondrial-genome
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 150
0
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1
reply
2.0k
views
psl alignment format and qstarts- qends calculation
pairwise-alignment psl whole-genome
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 150
0
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1
reply
5.5k
views
Comment: Comment: Blat Start And End Position Conventions
updated 2.1 years ago by 43k • written 9.2 years ago by ▴ 150
0
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0
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3.5k
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Comment: C: mitochondrial dna assembly comparison
9.4 years ago by vasilislenis ▴ 150
0
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1
reply
3.5k
views
Comment: Comment: mitochondrial dna assembly comparison
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
3
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4
replies
3.5k
views
mitochondrial dna assembly comparison
assembly mitochondria samtools consensus
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
0
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0
replies
10k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
0
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0
replies
10k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
0
votes
1
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10k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
0
votes
1
reply
10k
views
Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
7
votes
8
replies
10k
views
How to keep the header when I'm extracting a specific region from a bam file
sam mitochondria reference assembly bam
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 150
0
votes
0
replies
13k
views
Comment: Comment: bowtie2- running command problem
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 150
2
votes
2
replies
13k
views
bowtie2- running command problem
reference alignment bowtie2
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 150
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