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How to filter the BAM file using barcode list produced by 10x pipelines?
list
barcode
updated 19 months ago by
GenoMax
148k • written 23 months ago by
Info.shi
▴ 30
1
vote
0
replies
697
views
Comment:
Comment: How to make cut off linein cluster,
20 months ago by
Info.shi
▴ 30
3
votes
2
replies
697
views
How to make cut off linein cluster,
dendogram
Cutoff
R
updated 20 months ago by
GenoMax
148k • written 20 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.6k
views
Comment:
Comment: How to label by colour in PCA plot?
23 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.6k
views
Comment:
Comment: How to label by colour in PCA plot?
23 months ago by
Info.shi
▴ 30
0
votes
5
replies
1.6k
views
How to label by colour in PCA plot?
label
PCA
plot.
colure
updated 23 months ago by
seidel
11k • written 23 months ago by
Info.shi
▴ 30
0
votes
1
reply
615
views
Why barcode list doesn't filter exactly according to the same as list?
bam
barcode
23 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: how to get fastq file from cellranger?
24 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: how to get fastq file from cellranger?
24 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: how to get fastq file from cellranger?
24 months ago by
Info.shi
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: how to get fastq file from cellranger?
24 months ago by
Info.shi
▴ 30
0
votes
9
replies
1.9k
views
how to get fastq file from cellranger?
Cellranger
mkfastq
updated 24 months ago by
GenoMax
148k • written 24 months ago by
Info.shi
▴ 30
3
votes
3
replies
2.5k
views
Can we use UMAP clustering on bulk data?
R
UMAP
updated 2.2 years ago by
Ram
44k • written 2.2 years ago by
Info.shi
▴ 30
1
vote
2
replies
1.1k
views
How to change gene coordinate in gtf file?
perl
python
R
updated 2.8 years ago by
Istvan Albert
102k • written 2.8 years ago by
Info.shi
▴ 30
0
votes
0
replies
699
views
How to call variant by --max-depth for RNAseq
bcftools
Samtools
updated 18 months ago by
Ram
44k • written 3.0 years ago by
Info.shi
▴ 30
1
vote
1
reply
916
views
How to call variant minimum 3 read coverage to make consensus?
bcftools
mpileup
updated 3.2 years ago by
Istvan Albert
102k • written 3.2 years ago by
Info.shi
▴ 30
0
votes
0
replies
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
0
replies
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
3.2k
views
Comment:
Comment: What will the the classic approach is to make pairwise comparisons between th
3.2 years ago by
Info.shi
▴ 30
5
votes
13
replies
3.2k
views
What will the the classic approach is to make pairwise comparisons between the groups in edgeR?
edgeR
3.2 years ago by
Info.shi
▴ 30
0
votes
1
reply
1.4k
views
Comment:
Comment: How to remove Illumina TruSeq Index adapters reverse (R2 reads )
3.2 years ago by
Info.shi
▴ 30
2
votes
3
replies
1.4k
views
How to remove Illumina TruSeq Index adapters reverse (R2 reads )
Illumina
adapter
sequence
TruSeq
updated 3.2 years ago by
GenoMax
148k • written 3.2 years ago by
Info.shi
▴ 30
3
votes
2
replies
2.1k
views
How to convert (Newick) tree topology without branch length!
sed
awk
perl
updated 3.6 years ago by
Joe
21k • written 3.6 years ago by
Info.shi
▴ 30
0
votes
0
replies
520
views
How to Write same Gene name in column with strain identifier!
awk
NJ
perl
Phylogeny
updated 3.6 years ago by
benformatics
4.1k • written 3.6 years ago by
Info.shi
▴ 30
6
votes
5
replies
1.3k
views
How to create matrix from row data
sed
perl
R
awk
updated 3.6 years ago by
cpad0112
21k • written 3.6 years ago by
Info.shi
▴ 30
0
votes
1
reply
1.3k
views
Comment:
Comment: how to create matrix from row data.
3.6 years ago by
Info.shi
▴ 30
5
votes
5
replies
3.0k
views
How to remove all-N sequence entries from fasta file.
awk
perl
updated 3.6 years ago by
cpad0112
21k • written 3.6 years ago by
Info.shi
▴ 30
2
votes
1
reply
2.7k
views
How to make consensus sequence from aligned reads ?
sequence
Transcriptome
aligned
consensus
reads
3.7 years ago by
Info.shi
▴ 30
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