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802
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DeconRNASeq: Extract gene names from returned mixing proportions
deconrnaseq bioconductor r
3.3 years ago by LRStar ▴ 200
31
votes
19
replies
25k
views
10 follow
Convert .Gff3 File To 12-Column .Bed File
methylation next-gen
updated 2.6 years ago by 45k • written 11.9 years ago by ▴ 200
3
votes
5
replies
1.8k
views
Determine NCBI Nucleotide source of .fasta amino acid file
fasta ncbi nucleotide
updated 5.7 years ago by 153k • written 5.7 years ago by ▴ 200
0
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1
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1.8k
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Comment: C: Determine NCBI Nucleotide source of .fasta amino acid file
5.7 years ago by LRStar ▴ 200
0
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0
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749
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General pipeline for determining which tissues plasma cfDNA came from
cfdna liquidbiopsy
5.7 years ago by LRStar ▴ 200
55
votes
53
replies
12k
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How to determine species of paired-end .fastq files (low mapping rates and inconsistent findings)
bacteria kraken spades blast sendsketch
updated 5.8 years ago by ▴ 30 • written 6.0 years ago by ▴ 200
1
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1
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12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
0
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1
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12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
0
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0
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12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
0
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1
reply
12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
0
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2
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12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
1
vote
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
1
vote
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
1
vote
1
reply
2.5k
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No alignment for multiple samples using DIAMOND on Galaxy (possible causes?)
diamond galaxy metagenomics bacteria alignment
5.9 years ago by LRStar ▴ 200
1
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2
replies
12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
5.9 years ago by LRStar ▴ 200
1
vote
1
reply
12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
1
vote
1
reply
12k
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Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
2
replies
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
1
vote
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
1
vote
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
1
vote
3
replies
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
2
replies
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
1
vote
1
reply
12k
views
Comment: C: How to determine species of paired-end .fastq files (low mapping rates and incon
6.0 years ago by LRStar ▴ 200
0
votes
0
replies
2.6k
views
Comment: C: How to determine which NCBI sequence to map against (multiple sequences for sing
6.0 years ago by LRStar ▴ 200
0
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1
reply
2.6k
views
Comment: C: How to determine which NCBI sequence to map against (multiple sequences for sing
6.0 years ago by LRStar ▴ 200
0
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2
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2.6k
views
Comment: C: How to determine which NCBI sequence to map against (multiple sequences for sing
6.0 years ago by LRStar ▴ 200
0
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1
reply
2.6k
views
Comment: C: How to determine which NCBI sequence to map against (multiple sequences for sing
6.0 years ago by LRStar ▴ 200
0
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3
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2.6k
views
Comment: A: How to determine which NCBI sequence to map against (multiple sequences for sing
6.0 years ago by LRStar ▴ 200
6
votes
11
replies
2.6k
views
How to determine which NCBI sequence to map against (multiple sequences for single taxID)
ncbi sendsketch bwa
6.0 years ago by LRStar ▴ 200
0
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0
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3.0k
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Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
0
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0
replies
3.0k
views
Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
0
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1
reply
3.0k
views
Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Low Kraken mapping rate for unknown samples
6.0 years ago by LRStar ▴ 200
3
votes
9
replies
3.0k
views
Low Kraken mapping rate for unknown samples
bacteria alignment Assembly gene kraken
updated 6.0 years ago by 35k • written 6.0 years ago by ▴ 200
0
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1
reply
2.0k
views
Comment: C: Chromosome alignment visualization and gene elicitation for bacterial samples wi
6.0 years ago by LRStar ▴ 200
0
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1
reply
9.4k
views
Comment: C: Finding a specific gene in a fastq file without mapping the reads?
6.0 years ago by LRStar ▴ 200
5
votes
6
replies
2.0k
views
Chromosome alignment visualization and gene elicitation for bacterial samples with unknown reference genomes
assembly alignment bacteria gene muave
6.0 years ago by LRStar ▴ 200
0
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2
replies
2.0k
views
Comment: C: Chromosome alignment visualization and gene elicitation for bacterial samples wi
6.0 years ago by LRStar ▴ 200
0
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1
reply
3.5k
views
Comment: C: Assemble bacterial .fastq files and find differences (SPAdes followed by MUMmer)
6.0 years ago by LRStar ▴ 200
4
votes
3
replies
3.5k
views
Assemble bacterial .fastq files and find differences (SPAdes followed by MUMmer)
contig bacteria spades mummer SNP
updated 6.0 years ago by 22k • written 6.0 years ago by ▴ 200
3
votes
2
replies
1.6k
views
Assemble bacterial .fastq files and find differences in insertions, deletions, and duplications
Assembly insertions deletions bacteria
updated 6.1 years ago by 15k • written 6.1 years ago by ▴ 200
0
votes
0
replies
1.4k
views
Functional annotation chart from DAVID: Analogs or direct affiliations?
david annotation functional
6.6 years ago by LRStar ▴ 200
0
votes
0
replies
1.7k
views
Comment: C: Mapping metagenome information to amplicon sequences
7.1 years ago by LRStar ▴ 200
1
vote
2
replies
1.7k
views
Mapping metagenome information to amplicon sequences
ampliseq mapper
updated 7.1 years ago by ▴ 300 • written 7.1 years ago by ▴ 200
67 results • Page 1 of 2
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