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1.2k
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PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-Analysis
batch RNA-seq correction PCA
updated 10 months ago by ★ 2.1k • written 10 months ago by ▴ 20
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0
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1.2k
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Comment: Comment: PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-
10 months ago by Nelo ▴ 20
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1
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5.6k
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Comment: Comment: RNA-SEQ where only a subset of genes is of interest
12 months ago by Nelo ▴ 20
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1
reply
662
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How to handle Single-Level Batch Variable for Batch Correction in RNA-Seq Data
Combat RNA-seq batch-correction
updated 12 months ago by 45k • written 13 months ago by ▴ 20
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1
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1.1k
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Batch Effect Correction in RNA-seq Data Using SVA and DESeq2
SVA Batch DESeq2 RNA-seq
updated 13 months ago by 89k • written 13 months ago by ▴ 20
0
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0
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445
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How to Accurately Determine Unique Mapped Reads from HISAT2 Output summary file
mapped unique analysis Hisat2 RNA-seq
updated 13 months ago by 154k • written 13 months ago by ▴ 20
8
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12
replies
5.5k
views
7 follow
How to speed-up to contruct phylogenetic tree
MEGA tree phylogenetic
updated 18 months ago by 22k • written 21 months ago by ▴ 20
0
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1
reply
643
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Issue with Image Display and Saving on AgriGO v2 Platform
plants AgriGO gene-ontology non-model
updated 19 months ago by 45k • written 19 months ago by ▴ 20
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0
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5.5k
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Comment: Comment: How to speed-up to contruct phylogenetic tree
21 months ago by Nelo ▴ 20
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0
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5.5k
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Comment: Comment: How to speed-up to contruct phylogenetic tree
21 months ago by Nelo ▴ 20
0
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0
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5.5k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
21 months ago by Nelo ▴ 20
0
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2
replies
5.5k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
21 months ago by Nelo ▴ 20
13
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6
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1.6k
views
6 follow
how to sort fasta file according to a header file
fasta
updated 22 months ago by 45k • written 22 months ago by ▴ 20
1
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1
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1.6k
views
Comment: Comment: how to sort fasta file accroding to header
22 months ago by Nelo ▴ 20
0
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1
reply
790
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meta-analysis
meta-analysis
updated 23 months ago by 89k • written 23 months ago by ▴ 20
2
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6
replies
1.5k
views
batch correction in DESeq2
DESeq2
updated 23 months ago by 45k • written 23 months ago by ▴ 20
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0
replies
1.5k
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Comment: Comment: batch correction in DESeq2
23 months ago by Nelo ▴ 20
0
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1
reply
1.5k
views
Comment: Comment: batch correction in DESeq2
23 months ago by Nelo ▴ 20
0
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1
reply
1.5k
views
Comment: Comment: batch correction in DESeq2
updated 23 months ago by 89k • written 23 months ago by ▴ 20
2
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4
replies
1.3k
views
command to extract SRA fastq data summary
edirect NCBI SRA
updated 2.1 years ago by 154k • written 2.1 years ago by ▴ 20
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1
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1.3k
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Comment: Comment: command to extract SRA fastq data summary
2.1 years ago by Nelo ▴ 20
2
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4
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2.6k
views
To identify Differentially Expressed Genes and Unraveling Upregulated and Downregulated Genes using DESeq2 in R
R DEGs DESeq2
updated 2.2 years ago by 89k • written 2.2 years ago by ▴ 20
0
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1
reply
2.6k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
2.2 years ago by Nelo ▴ 20
0
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0
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2.6k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
2.2 years ago by Nelo ▴ 20
0
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0
replies
1.6k
views
Comment: Comment: fisher's method for p-value combination in meta-analysis
updated 2.2 years ago by 15k • written 2.2 years ago by ▴ 20
2
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2
replies
1.6k
views
fisher's method for p-value combination in meta-analysis
Differential p-value fisher expression study
updated 2.2 years ago by 15k • written 2.2 years ago by ▴ 20
1
vote
1
reply
895
views
DESeq2 with multiple factors
DESeq2
updated 2.4 years ago by ★ 1.9k • written 2.4 years ago by ▴ 20
1
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6
replies
1.6k
views
DESeq2
heatmap R DESeq2
2.4 years ago by Nelo ▴ 20
0
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0
replies
1.6k
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Comment: Comment: DESeq2
2.4 years ago by Nelo ▴ 20
0
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1
reply
1.6k
views
Comment: Comment: DESeq2
2.4 years ago by Nelo ▴ 20
0
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1
reply
1.6k
views
Comment: Comment: DESeq2
2.4 years ago by Nelo ▴ 20
3
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6
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3.2k
views
when to use trimmomatic
trimmomatic multiqc sra
updated 2.4 years ago by ▴ 250 • written 2.4 years ago by ▴ 20
0
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1
reply
3.2k
views
Comment: Comment: when to use trimmomatic
2.4 years ago by Nelo ▴ 20
1
vote
1
reply
843
views
Replace header of fasta file according to another file
fasta
updated 2.6 years ago by 45k • written 2.6 years ago by ▴ 20
0
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1
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1.8k
views
Comment: Comment: extract pattern using grep/sed
2.6 years ago by Nelo ▴ 20
1
vote
4
replies
1.8k
views
extract pattern using grep/sed
grep linux sed
updated 2.6 years ago by 45k • written 2.6 years ago by ▴ 20
0
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0
replies
3.6k
views
Comment: Comment: how to automate this process
2.6 years ago by Nelo ▴ 20
0
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0
replies
1.2k
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Comment: Comment: promoter analysis in plant
2.6 years ago by Nelo ▴ 20
0
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1
reply
4.7k
views
Comment: Comment: fastq-dump download pair-end fastq without split-files
2.7 years ago by Nelo ▴ 20
0
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0
replies
1.2k
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Comment: Comment: promoter analysis in plant
2.7 years ago by Nelo ▴ 20
0
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3
replies
1.2k
views
promoter analysis in plant
GAD plantCARE script python result
2.6 years ago by Nelo ▴ 20
0
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1
reply
2.0k
views
Comment: Comment: Command to insert column with text according to specific text in another column
3.0 years ago by Nelo ▴ 20
0
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1
reply
2.0k
views
Comment: Comment: Command to insert column with text according to specific text in another column
3.0 years ago by Nelo ▴ 20
4
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6
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2.0k
views
Command to insert column with text according to specific text in another column
commands unix
updated 3.0 years ago by 89k • written 3.0 years ago by ▴ 20
0
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0
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3.0k
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Comment: Comment: How to run microsynteny plotter from McScan?
3.0 years ago by Nelo ▴ 20
0
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0
replies
767
views
Comment: Comment: How to modify the result rank of Multiple sequence alignment
3.7 years ago by Nelo ▴ 20
0
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1
reply
767
views
How to modify the result rank of Multiple sequence alignment
rearrange FASTA MSA
3.7 years ago by Nelo ▴ 20
0
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1
reply
1.5k
views
Comment: Comment: What should be the best parameter to perform blastp
3.7 years ago by Nelo ▴ 20
0
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3
replies
1.5k
views
What should be the best parameter to perform blastp
command parameter Blastp line
updated 3.7 years ago by 154k • written 3.7 years ago by ▴ 20
0
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1
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1.9k
views
Comment: Comment: Information like Genome size, gene count, chromosomes numbers, contigs and scaff
3.8 years ago by Nelo ▴ 20
82 results • Page 1 of 2
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