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3
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1.3k
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PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-Analysis
batch RNA-seq correction PCA
updated 12 months ago by ★ 2.1k • written 12 months ago by ▴ 20
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0
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1.3k
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Comment: Comment: PCA Plotting Differences Before and After Batch Correction in RNA-seq for Meta-
12 months ago by Nelo ▴ 20
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1
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5.9k
views
Comment: Comment: RNA-SEQ where only a subset of genes is of interest
13 months ago by Nelo ▴ 20
0
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1
reply
755
views
How to handle Single-Level Batch Variable for Batch Correction in RNA-Seq Data
Combat RNA-seq batch-correction
updated 14 months ago by 45k • written 14 months ago by ▴ 20
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1
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1.3k
views
Batch Effect Correction in RNA-seq Data Using SVA and DESeq2
SVA Batch DESeq2 RNA-seq
updated 14 months ago by 90k • written 14 months ago by ▴ 20
0
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0
replies
487
views
How to Accurately Determine Unique Mapped Reads from HISAT2 Output summary file
mapped unique analysis Hisat2 RNA-seq
updated 15 months ago by 154k • written 15 months ago by ▴ 20
8
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12
replies
6.2k
views
7 follow
How to speed-up to contruct phylogenetic tree
MEGA tree phylogenetic
updated 20 months ago by 22k • written 23 months ago by ▴ 20
0
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1
reply
758
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Issue with Image Display and Saving on AgriGO v2 Platform
plants AgriGO gene-ontology non-model
updated 20 months ago by 45k • written 20 months ago by ▴ 20
0
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0
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6.2k
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Comment: Comment: How to speed-up to contruct phylogenetic tree
23 months ago by Nelo ▴ 20
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0
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6.2k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
23 months ago by Nelo ▴ 20
0
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0
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6.2k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
23 months ago by Nelo ▴ 20
0
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2
replies
6.2k
views
Comment: Comment: How to speed-up to contruct phylogenetic tree
23 months ago by Nelo ▴ 20
13
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6
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1.9k
views
6 follow
how to sort fasta file according to a header file
fasta
updated 24 months ago by 45k • written 24 months ago by ▴ 20
1
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1
reply
1.9k
views
Comment: Comment: how to sort fasta file accroding to header
24 months ago by Nelo ▴ 20
0
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1
reply
855
views
meta-analysis
meta-analysis
updated 2.0 years ago by 90k • written 2.0 years ago by ▴ 20
2
votes
6
replies
1.6k
views
batch correction in DESeq2
DESeq2
updated 2.0 years ago by 45k • written 2.0 years ago by ▴ 20
0
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0
replies
1.6k
views
Comment: Comment: batch correction in DESeq2
2.0 years ago by Nelo ▴ 20
0
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1
reply
1.6k
views
Comment: Comment: batch correction in DESeq2
2.0 years ago by Nelo ▴ 20
0
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1
reply
1.6k
views
Comment: Comment: batch correction in DESeq2
updated 2.0 years ago by 90k • written 2.0 years ago by ▴ 20
2
votes
4
replies
1.4k
views
command to extract SRA fastq data summary
edirect NCBI SRA
updated 2.2 years ago by 154k • written 2.2 years ago by ▴ 20
0
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1
reply
1.4k
views
Comment: Comment: command to extract SRA fastq data summary
2.2 years ago by Nelo ▴ 20
2
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4
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2.7k
views
To identify Differentially Expressed Genes and Unraveling Upregulated and Downregulated Genes using DESeq2 in R
R DEGs DESeq2
updated 2.3 years ago by 90k • written 2.3 years ago by ▴ 20
0
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1
reply
2.7k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
2.3 years ago by Nelo ▴ 20
0
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0
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2.7k
views
Comment: Comment: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
2.3 years ago by Nelo ▴ 20
0
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0
replies
1.8k
views
Comment: Comment: fisher's method for p-value combination in meta-analysis
updated 2.3 years ago by 15k • written 2.3 years ago by ▴ 20
2
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2
replies
1.8k
views
fisher's method for p-value combination in meta-analysis
Differential p-value fisher expression study
updated 2.3 years ago by 15k • written 2.3 years ago by ▴ 20
1
vote
1
reply
944
views
DESeq2 with multiple factors
DESeq2
updated 2.5 years ago by ★ 1.9k • written 2.5 years ago by ▴ 20
1
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6
replies
1.7k
views
DESeq2
heatmap R DESeq2
2.5 years ago by Nelo ▴ 20
0
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0
replies
1.7k
views
Comment: Comment: DESeq2
2.5 years ago by Nelo ▴ 20
0
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1
reply
1.7k
views
Comment: Comment: DESeq2
2.6 years ago by Nelo ▴ 20
0
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1
reply
1.7k
views
Comment: Comment: DESeq2
2.6 years ago by Nelo ▴ 20
3
votes
6
replies
3.4k
views
when to use trimmomatic
trimmomatic multiqc sra
updated 2.6 years ago by ▴ 250 • written 2.6 years ago by ▴ 20
0
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1
reply
3.4k
views
Comment: Comment: when to use trimmomatic
2.6 years ago by Nelo ▴ 20
1
vote
1
reply
895
views
Replace header of fasta file according to another file
fasta
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 20
0
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1
reply
1.9k
views
Comment: Comment: extract pattern using grep/sed
2.8 years ago by Nelo ▴ 20
1
vote
4
replies
1.9k
views
extract pattern using grep/sed
grep linux sed
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 20
0
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0
replies
3.7k
views
Comment: Comment: how to automate this process
2.8 years ago by Nelo ▴ 20
0
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0
replies
1.3k
views
Comment: Comment: promoter analysis in plant
2.8 years ago by Nelo ▴ 20
0
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1
reply
4.8k
views
Comment: Comment: fastq-dump download pair-end fastq without split-files
2.8 years ago by Nelo ▴ 20
0
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0
replies
1.3k
views
Comment: Comment: promoter analysis in plant
2.8 years ago by Nelo ▴ 20
0
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3
replies
1.3k
views
promoter analysis in plant
GAD plantCARE script python result
2.8 years ago by Nelo ▴ 20
0
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1
reply
2.2k
views
Comment: Comment: Command to insert column with text according to specific text in another column
3.1 years ago by Nelo ▴ 20
0
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1
reply
2.2k
views
Comment: Comment: Command to insert column with text according to specific text in another column
3.1 years ago by Nelo ▴ 20
4
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6
replies
2.2k
views
Command to insert column with text according to specific text in another column
commands unix
updated 3.1 years ago by 90k • written 3.1 years ago by ▴ 20
0
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0
replies
3.1k
views
Comment: Comment: How to run microsynteny plotter from McScan?
3.2 years ago by Nelo ▴ 20
0
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0
replies
829
views
Comment: Comment: How to modify the result rank of Multiple sequence alignment
3.8 years ago by Nelo ▴ 20
0
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1
reply
829
views
How to modify the result rank of Multiple sequence alignment
rearrange FASTA MSA
3.8 years ago by Nelo ▴ 20
0
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1
reply
1.6k
views
Comment: Comment: What should be the best parameter to perform blastp
3.9 years ago by Nelo ▴ 20
0
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3
replies
1.6k
views
What should be the best parameter to perform blastp
command parameter Blastp line
updated 3.9 years ago by 154k • written 3.9 years ago by ▴ 20
0
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1
reply
2.0k
views
Comment: Comment: Information like Genome size, gene count, chromosomes numbers, contigs and scaff
3.9 years ago by Nelo ▴ 20
82 results • Page 1 of 2
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