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Comment: Comment: Understanding log2 transformation for TPM
19 months ago by JACKY ▴ 140
0
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3
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2.0k
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Understanding log2 transformation for TPM
r transformation TPM log2
updated 18 months ago by ★ 1.2k • written 19 months ago by ▴ 140
0
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1
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882
views
Comment: Comment: Batch effect correction with cell type enrichment analysis
19 months ago by JACKY ▴ 140
3
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0
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4.0k
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Comment: Comment: Convert FPKM to TPM in R
19 months ago by JACKY ▴ 140
0
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1
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882
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Comment: Comment: Batch effect correction with cell type enrichment analysis
19 months ago by JACKY ▴ 140
5
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1
reply
1.3k
views
argument ".f" is missing, with no default
r exons genes
updated 19 months ago by 13k • written 19 months ago by ▴ 140
2
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6
replies
882
views
Batch effect correction with cell type enrichment analysis
limma RNA-seq r batch-effect
updated 19 days ago by 43k • written 19 months ago by ▴ 140
0
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0
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2.6k
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Comment: Comment: The best way to get gene lengths for 15K+ genes?
19 months ago by JACKY ▴ 140
0
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1
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2.6k
views
Comment: Comment: The best way to get gene lengths for 15K+ genes?
19 months ago by JACKY ▴ 140
0
votes
1
reply
2.6k
views
Comment: Comment: The best way to get gene lengths for 15K+ genes?
19 months ago by JACKY ▴ 140
0
votes
1
reply
2.6k
views
Comment: Comment: The best way to get gene lengths for 15K+ genes?
19 months ago by JACKY ▴ 140
0
votes
1
reply
2.6k
views
Comment: Comment: The best way to get gene lengths for 15K+ genes?
19 months ago by JACKY ▴ 140
0
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0
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532
views
Comment: Comment: Comparing gene expression between two groups, using boxplots
20 months ago by JACKY ▴ 140
0
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1
reply
532
views
Comparing gene expression between two groups, using boxplots
r DEG TPM boxplot
20 months ago by JACKY ▴ 140
0
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1
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589
views
Comment: Comment: TPM normalization result
20 months ago by JACKY ▴ 140
1
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3
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589
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TPM normalization result
normalization r TPM
updated 20 months ago by 3.9k • written 20 months ago by ▴ 140
0
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0
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2.6k
views
Comment: Comment: The best way to get gene lengths for 15K+ genes?
21 months ago by JACKY ▴ 140
2
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12
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2.6k
views
The best way to get gene lengths for 15K+ genes?
r EDAseq RNA-seq
19 months ago by JACKY ▴ 140
0
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0
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2.0k
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Comment: Comment: Warning - longer object length is not a multiple of shorter object length
21 months ago by JACKY ▴ 140
0
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1
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2.0k
views
Comment: Comment: Warning - longer object length is not a multiple of shorter object length
21 months ago by JACKY ▴ 140
0
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7
replies
2.0k
views
Warning - longer object length is not a multiple of shorter object length
genelength r TPM RNA-seq
updated 20 months ago by ★ 7.1k • written 21 months ago by ▴ 140
0
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0
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371
views
What does batch effect correction mean?
effects batch r data limma
21 months ago by JACKY ▴ 140
0
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0
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766
views
Comment: Comment: Searching for RNA-seq melanoma samples in TCGA or cBioPortal
22 months ago by JACKY ▴ 140
0
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0
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758
views
Comment: Comment: Error with TCGA package - TCGAbiolinks
22 months ago by JACKY ▴ 140
0
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2
replies
758
views
Error with TCGA package - TCGAbiolinks
TCGA r cancer
22 months ago by JACKY ▴ 140
4
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6
replies
1.9k
views
ESTIMATE tumor purity
purity r cancer
22 months ago by JACKY ▴ 140
2
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0
replies
1.9k
views
Answer: Answer: ESTIMATE tumor purity
22 months ago by JACKY ▴ 140
0
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3
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766
views
Searching for RNA-seq melanoma samples in TCGA or cBioPortal
TCGA r cBioPortal cancer
updated 21 months ago by ▴ 120 • written 22 months ago by ▴ 140
0
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0
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1.9k
views
Comment: Comment: ESTIMATE tumor purity
22 months ago by JACKY ▴ 140
0
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0
replies
1.9k
views
Comment: Comment: ESTIMATE tumor purity
22 months ago by JACKY ▴ 140
0
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1
reply
1.9k
views
Comment: Comment: ESTIMATE tumor purity
22 months ago by JACKY ▴ 140
0
votes
1
reply
514
views
From counts to TPM code verification
TPM normalization r
updated 23 months ago by 82k • written 23 months ago by ▴ 140
0
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1
reply
1.3k
views
Comment: Comment: A check over my code using Limma DE, starting from normalized data
23 months ago by JACKY ▴ 140
0
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0
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1.3k
views
Comment: Comment: A check over my code using Limma DE, starting from normalized data
23 months ago by JACKY ▴ 140
0
votes
2
replies
1.3k
views
Comment: Comment: A check over my code using Limma DE, starting from normalized data
23 months ago by JACKY ▴ 140
0
votes
7
replies
1.3k
views
A check over my code using Limma DE, starting from normalized data
limma r
updated 19 months ago by ★ 7.1k • written 23 months ago by ▴ 140
0
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1
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1.1k
views
Comment: Comment: Cellular deconvolution does not work without batch effect correction
2.1 years ago by JACKY ▴ 140
1
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4
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1.1k
views
Cellular deconvolution does not work without batch effect correction
batch effect r deconvolution
updated 2.1 years ago by 82k • written 2.1 years ago by ▴ 140
0
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1
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1.1k
views
Comment: Comment: Error: Application depends on package "rlang" but it is not installed
2.1 years ago by JACKY ▴ 140
0
votes
3
replies
1.1k
views
Error: Application depends on package "rlang" but it is not installed
shiny R
updated 2.1 years ago by 27k • written 2.1 years ago by ▴ 140
0
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0
replies
336
views
How to check if genes are important in cancer, using depmap or cBioPortal?
cBioPortal r depmap
2.1 years ago by JACKY ▴ 140
0
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0
replies
530
views
Comment: Comment: associate EBV to cancer
2.1 years ago by JACKY ▴ 140
0
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0
replies
756
views
Comment: Comment: low counts in DESeq2
2.1 years ago by JACKY ▴ 140
0
votes
2
replies
530
views
associate EBV to cancer
EBV r depmap
2.1 years ago by JACKY ▴ 140
0
votes
2
replies
756
views
low counts in DESeq2
DESeq2 r
2.1 years ago by JACKY ▴ 140
0
votes
1
reply
909
views
Comment: Comment: How to deal with batch effects of multiple datasets?
2.2 years ago by JACKY ▴ 140
0
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1
reply
909
views
Comment: Comment: How to deal with batch effects of multiple datasets?
2.2 years ago by JACKY ▴ 140
0
votes
5
replies
909
views
How to deal with batch effects of multiple datasets?
DESeq2 r
updated 2.1 years ago by 14k • written 2.2 years ago by ▴ 140
0
votes
0
replies
319
views
Primary and Metastatic genes
cancer DESeq2
2.2 years ago by JACKY ▴ 140
1
vote
7
replies
1.8k
views
Linear regression on RNA-seq data
r regression
2.2 years ago by JACKY ▴ 140
120 results • Page 2 of 3
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