Question: Where have the bacterial genomes gone in Genbank ftp?
1
gravatar for briony
3.2 years ago by
briony10
briony10 wrote:

The Genbank ftp site (ftp://ftp.ncbi.nih.gov/genomes/) used to contain a folder called Bacteria, with all the bacterial genomes, but it seems to have disappeared. Does anyone know where these might have been moved to?  I can't find anything about it on the NCBI site, and I need to access some gff files ASAP.

myposts • 3.4k views
ADD COMMENTlink modified 3.2 years ago by a.zielezinski8.6k • written 3.2 years ago by briony10
6
gravatar for a.zielezinski
3.2 years ago by
a.zielezinski8.6k
a.zielezinski8.6k wrote:

Assembled genome sequence and annotation data for GenBank genome assemblies is now (from 02-DEC-2015) available under: ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/.

ADD COMMENTlink modified 3.2 years ago • written 3.2 years ago by a.zielezinski8.6k
3

and refseq here: ftp://ftp.ncbi.nih.gov/genomes/refseq/bacteria/

Be careful with clicking on those links in a browser these are huge directories.

ADD REPLYlink written 3.2 years ago by Michael Dondrup46k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1509 users visited in the last hour