I have a pipeline of scripts that together produce different plots to describe some properties of genes involved in the same pathway.
For the moment, I execute them locally through a Makefile. The only thing that I have to do is to fill a list of genes in a file, and then call the main function, and it will automatically generate some graphs and tables on them.
I wonder, how can I translate this pipeline in a web application? I already have the scripts, I just need a way to create a web page where an user can upload a list of files and then download the results.
I have some experience with django and the earlier plone, but so much time has passed and I forgot how to use them... how would you implement it? By the way, is there any special framework for bioinformatics-related stuff? Or are there any special rules or standards that I should follow in order to integrate a web application with other bioinformatics-related services?