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Job: Bioinformatics Programmer and Analyst At Athletigen
bioinformatics-programmer
updated 6 days ago by 36k • written 7.2 years ago by 7.3k
0
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2.6k
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Job: PhD Studentship: Bioinformatics Analysis of Host/Pathogen Interactions - Sydney, Australia
RNA-Seq R epigenetics single-cell
updated 6 days ago by 36k • written 6.7 years ago by • 0
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2.6k
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Job: Postdoctoral Fellowships in Bioinformatics and Computational Biology, American Museum of Natural History
Postdoctoral Computational-Biology
updated 6 days ago by 36k • written 6.8 years ago by ▴ 20
0
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2.3k
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Job: Bioinformatics Researcher - University of Adelaide, South Australia
Australia
updated 6 days ago by 36k • written 6.8 years ago by • 0
1
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0
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2.2k
views
Job: Bioinformatics Data and Application Specialist - Andover/Cambridge, MA
Data-Specialist
updated 1 day ago by 36k • written 6.8 years ago by ▴ 10
1
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0
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2.2k
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Job: Doctoral and Graduate Student Fellowships, American Museum of Natural History Richard Gilder Graduate School, USA
Biology Fellowships PhD
updated 6 days ago by 36k • written 6.8 years ago by ▴ 20
0
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0
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2.1k
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Job: Postdoctoral Fellow, Bioinformatics, University of Arizona, Phoenix, USA
genome rna-seq next-gen-sequencing alignment
updated 6 days ago by 36k • written 6.8 years ago by • 0
0
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5
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1.9k
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Job: Bioinformatics Scientist II, Electric Boogaloo. Philadelphia, PA
pathobiology
updated 6 days ago by 36k • written 6.8 years ago by 20k
0
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0
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1.9k
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Job: Open Position: Scientist, Computational Biology, Immuno-Oncology -- FLX Bio, South San Francisco
oncology immunology san-francisco
updated 4 hours ago by 36k • written 6.8 years ago by ▴ 20
0
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0
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1.8k
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Job: Computational Biologist, GNS Healthcare, Cambridge, MA
RNA-Seq R network DNA-Seq
updated 6 days ago by 36k • written 6.8 years ago by ▴ 10
1
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0
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1.7k
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Job: Multiple Positions for cBioPortal for Cancer Genomics, Dana-Farber Cancer Institute
open-source genomics cancer
updated 6 days ago by 36k • written 6.8 years ago by ▴ 10
0
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0
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1.7k
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Job: Bioinformatics Research Investigator - GNF
research-investigator
updated 6 days ago by 36k • written 6.8 years ago by • 0
2
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1
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1.5k
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Job: Junior Bioinformatician for direct to consumer sports genetics software
sports-science SNP genotype
updated 6 days ago by 36k • written 6.8 years ago by ▴ 20
0
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0
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1.5k
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Job: Three positions in population biology/genetics, functional genomics of disease vectors, LONDON
population-biology functional-genomics
updated 2 days ago by 36k • written 6.8 years ago by • 0
0
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0
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1.5k
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Job: Senior Bioinformatics Researcher - University of Adelaide, South Australia
R Australia c-plus-plus java
updated 6 days ago by 36k • written 6.8 years ago by • 0
1
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0
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1.4k
views
Job: Associate BIoinformatician in Boston
Associate-Bioinformatician
updated 2 days ago by 36k • written 6.8 years ago by ▴ 150
0
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0
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1.3k
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Job: Senior Bioinformatician for direct to consumer sports genetics software
sports-science
updated 6 days ago by 36k • written 6.8 years ago by ▴ 20
1
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0
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135
views
Job: Bioinformatics Activity Lead Position in HIV Laboratory at CDC
HIV biologist Epidemic computational the End bioinformation
6 days ago by bis3 ▴ 10
0
votes
0
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102
views
Job: Bioinformatics programming with HIV Databases, Los Alamos National Lab
programmer job
updated 2 days ago by 2.2k • written 2 days ago by ▴ 10
0
votes
0
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54
views
Job: Assistant Professor (tenure-track) and Professor positions in Data Science
job statistics bioinformatics datascience faculty
7 hours ago by aaistaustria ▴ 10
0
votes
0
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41
views
Job: Bioinformatics Core Facility position in Mainz, Germany
core ngs staff
3 hours ago by quant ▴ 60
21 results • Page 1 of 1
Recent Votes
Answer: Changing the x-axis in ggseqlogo in R
Answer: Installing ensembl-vep
Answer: Installing ensembl-vep
Answer: Changing the x-axis in ggseqlogo in R
Answer: Best way to detect CNV using WGS data
Best way to detect CNV using WGS data
Answer: Concatenate information columns from multiple identical bed files.
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Recent Replies
Comment: using gatk haplotypecaller for variants extraction by Nemo • 0
thanks @Ram, yes I searched for my question, and I read the link you sent. As I found I can use gatk haplotypecaller (I am skeptical yet) b…
Comment: How to deal with `'select()' returned 1:many mapping between keys and columns` w by LChart 640
> Is it because some genes do not have entrez ID? Yes. > If so, how should I deal with it? If you strictly require entrez IDs, then you…
Comment: using gatk haplotypecaller for variants extraction by Ram 36k
> I see the sample commands but I noticed they are for DNA seq data. So, it means I cannot use gatk haplotypecaller for rna seq data? You…
Comment: How to use RSEM to quantify genes and transcript expression from STAR outpute fi by Ram 36k
The "what is this supposed to be" part is the output prefix. Are you using `>&` when you mean to use `&>`? In any case, use `>rsem.out 2>rs…
Comment: Gene-based and transcriptome-based profiling by GenoMax 119k
It may be a case of semantics. When arrays were popular in early 2000s, people used the term "gene-based profiling". Both cases one is look…
Comment: Changing the x-axis in ggseqlogo in R by Ram 36k
I've moved the comment to an answer. Please accept it to mark the post as solved.
Comment: Changing the x-axis in ggseqlogo in R by margo ▴ 40
Thank you! That works!
Answer: Changing the x-axis in ggseqlogo in R by rpolicastro 9.4k
Untested but adding `+ scale_x_continuous(breaks=1:21, labels=-10:10)` to the returned ggplot2 object should work.
Answer: Installing ensembl-vep by tomas4482 ▴ 300
You can either create a new environment using Anaconda3 and download it via `conda install -n vep -c bioconda ensembl-vep` or install every…
Comment: Gene-based and transcriptome-based profiling by Chris • 0
Thank you so much for detailed answer! I am not confused about transcriptome-base profiling because I think it is RNA-Seq analysis. I only …
Answer: Concatenate information columns from multiple identical bed files. by Trivas ▴ 480
If you're comfortable using R, you can load the `.bed` files as tab delimited files, then `full_join` using `chr`, `start`, and `stop` as y…
Comment: Gene types to use for RNA counts case-control by i.sudbery 15k
Its not that we don't know which transcripts are poly-adenylated and which arn't - its just that that information is not encoded in the gen…
Comment: Gene types to use for RNA counts case-control by i.sudbery 15k
DESeq2 automatically removes low expression genes, no? And it does that by picking the the expression threshold that maximises the number …
Comment: Impute genotype probabilities with BEAGLE by dario.galanti92 • 0
Well, all those SNPs are missing in the first individual (TA_AM_01_01_F3_CC0_M1_1) in the input (GT --> "./.") and they are imputed and gen…
Comment: How many reads will be removed after markduplicates in general? by Sashu ▴ 10
Returning to the original question， would you think it's strange that the depth of bulk DNA-seq data decreases too much after markduplicat…
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