Showing selected topics • reset
1
vote
2
answers
105
views
2
answers
written 18 days ago by
Lisa Prudnikow • 0
• updated
18 days ago by
Jorge Amigo ♦ 12k
3
votes
2
answers
1.4k
views
2
answers
4
votes
1
answer
2.5k
views
1
answer
written 6.9 years ago by
fryx.asraniel • 10
• updated
20 days ago by
Biostar ♦♦ 20
0
votes
1
answer
135
views
1
answer
written 21 days ago by
thisisinspiredme08 • 0
• updated
21 days ago by
Pierre Lindenbaum ♦ 133k
5
votes
4
answers
3.9k
views
5 follow
4
answers
written 8.1 years ago by
ibmat.study • 0
• updated
5 weeks ago by
liaojy3 • 0
17
votes
4
answers
12k
views
15 follow
4
answers
written 8.7 years ago by
Adam Cornwell • 440
• updated
5 weeks ago by
achenchik • 0
1
vote
1
answer
148
views
1
answer
written 6 weeks ago by
screadore • 0
• updated
6 weeks ago by
Pierre Lindenbaum ♦ 133k
5
votes
2
answers
166
views
2
answers
1
vote
1
answer
181
views
1
answer
written 9 weeks ago by
nobu.kim66 • 10
• updated
9 weeks ago by
Jean-Karim Heriche ♦ 24k
0
votes
2
answers
140
views
2
answers
written 10 weeks ago by
mimi • 0
• updated
10 weeks ago by
antonioggsousa • 1.9k
0
votes
0
answers
191
views
0
answers
2
votes
1
answer
139
views
1
answer
3
votes
2
answers
179
views
2
answers
1
vote
1
answer
180
views
1
answer
3
votes
0
answers
1.2k
views
0
answers
written 2.2 years ago by
fmail1221 • 0
• updated
4 months ago by
swanthana.r • 10
0
votes
0
answers
197
views
0
answers
written 4 months ago by
rob.costa1234 • 260
• updated
4 months ago by
Biostar ♦♦ 20
Recent Votes
- A: How to get all genes for a specific list of regions in R preferably using Biomar
- A: Does Liftover Have Single-Base Resolution?
- A: Adding p value to Vlnplot in Seurat
- A: Adding p value to Vlnplot in Seurat
- C: How Can I Count Snps In My Final Vcf Files
- C: build the expression matrix step by step from GEO raw data
- A: Module trait association in wgcna
Recent Locations •
All »
- University Park, USA, 1 minute ago
- France/Nantes/Institut du Thorax - INSERM UMR1087, 2 minutes ago
- Belgium/Ghent/Ugent, 2 minutes ago
- Republic of Ireland, 2 minutes ago
- Norwegian University of Life Sciences, 2 minutes ago
Recent Awards • All »
- Appreciated to Kevin Blighe ♦ 69k
- Teacher to Istvan Albert ♦♦ 86k
- Good Answer to Mensur Dlakic • 8.2k
- Teacher to WouterDeCoster ♦ 45k
- Teacher to Mensur Dlakic • 8.2k
- Appreciated to Mensur Dlakic • 8.2k
Recent Replies
-
C: run a tool from python by
zak • 0
os.chdir(my path) \\ cmd = perl + pathBam + path... \\ subprocess.call(cmd, shell=tru...
-
C: run a tool from python by
zak • 0
i knew i have to use os.chdir () but i dont know how to apply it. os.chdir (my path) and the lin...
-
C: Sequence Duplication Levels and Clumpify by
GenoMax ♦ 94k
You are looking for perfectly matching reads with `subs=0` so this looks like a reasonable result...
-
C: Demultiplexing MinION reads by
GenoMax ♦ 94k
https://github.com/rrwick/Porechop#barcode-demultiplexing Scroll down at the link above. Looks l...
-
C: run a tool from python by
Joe ♦ 18k
You are right that you need `subprocess` to run the command. You can either express your full pat...
-
C: Demultiplexing MinION reads by
jeccy.J • 50
Could you please let me know the running command. I checked the manual it looks like : porechop ...
-
A: How Can I Count Snps In My Final Vcf Files by
4galaxy77 • 90
If all your variants in the vcf are SNPS, then a very quick way is to first index and then index ...
-
A: Demultiplexing MinION reads by
shelkmike • 320
I use Porechop and I have no problems with it.
-
C: Non-coding region of WGS by
FL512 • 0
UPDATE: for someone like me, this is how I downloaded the region of interests. https://www.biosta...
-
C: How Can I Count Snps In My Final Vcf Files by
Pierre Lindenbaum ♦ 133k
I'm sorry but this is wrong. > echo "chr1 123 . A C,,G" | awk '{if ($4~/[ATCG]/ &&...
-
C: Using Deseq2 for RNA-seq analysis of 4 different groups of cells by
ATpoint ♦ 44k
Are all these cancers from the same study, so is the wetlab processing the same. You can only mea...
-
A: How Can I Count Snps In My Final Vcf Files by
dario.galanti92 • 0
Here is a quick way to count biallelic SNPs in vcf.gz files (use cat instead of zcat for uncompre...
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 2035 users visited in the last hour