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4
votes
1
answer
310
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1
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Defining the genomic context given a genomic position
enhancer promoter intro exon rna-seq written 8 months ago by mike • 50 • updated 8 months ago by jared.andrews07 • 2.7k
3
votes
1
answer
280
views
1
answer
Correlating putative enhancer elements with gene expression
enhancer gene expression atac-seq rna-seq written 9 months ago by rbronste • 240 • updated 9 months ago by kristoffer.vittingseerup • 2.0k
1
vote
0
answers
661
views
0
answers
How do I perform a motif search on a specific fasta sequence?
homer enhancer written 10 months ago by a.rex • 190 • updated 10 months ago by RamRS ♦ 22k
0
votes
0
answers
326
views
0
answers
Annotation File for Enchancer Regions in Ensembl mm10 genome
enhancer chip-seq written 12 months ago by hkarakurt • 60
2
votes
1
answer
847
views
1
answer
Which Enhancer regulates which gene
gene enhancer next-gen snp tad written 20 months ago by osieman52 • 20 • updated 20 months ago by YaGalbi • 1.4k
1
vote
0
answers
605
views
0
answers
Suggested tools for enhancer
enhancer vista enhancer browser written 20 months ago by steffanchristiansen • 0
1
vote
1
answer
677
views
1
answer
Enhancer distance cutoff
enhancer chip-seq written 22 months ago by sysbiocoder • 170 • updated 22 months ago by kristoffer.vittingseerup • 2.0k
11
votes
2
answers
832
views
2
answers
If i am interested in a transcription factor, why would i focus on coding and non coding SNPs?
enhancer promoter snp exon transcription written 23 months ago by mesencephalon • 0 • updated 23 months ago by Emily_Ensembl ♦ 18k
51
votes
2
answers
2.3k
views
10 follow
2
answers
Is annotation of enhancers to nearest gene pointless?
annotation enhancer forum written 2.2 years ago by YaGalbi • 1.4k
0
votes
0
answers
856
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0
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Converting regions based on gene start , body , end site ,... to promoter ,exon, intron
gene sites promoter enhancer exon written 2.2 years ago by niutster • 80
2
votes
0
answers
992
views
0
answers
Tutorial: Accurate prediction of active enhancers using PARE
enhancer chip-seq histone modification tutorial written 2.3 years ago by Sachin Pundhir • 80
5
votes
1
answer
992
views
1
answer
How to assign Active Enhancer to every genes within 10 kb region?
enhancer bedops closest written 2.4 years ago by Bioinformatist Newbie • 230 • updated 2.4 years ago by Alex Reynolds ♦ 28k
0
votes
0
answers
3.8k
views
0
answers
Job: Two PhD scholarships in Computational Genomics and Transcriptional Regulatory Variation
genetics enhancer gene regulation job genomics written 2.6 years ago by Robin Andersson • 60
1
vote
0
answers
676
views
0
answers
Enhancer regions for rn5
enhancer rn5 written 2.7 years ago by bioinfc37 • 30
2
votes
3
answers
1.5k
views
3
answers
Enhancers in Introns
gene enhancer intron human written 2.8 years ago by kyeemon7 • 0 • updated 2.8 years ago by ajsn6c • 0
1
vote
1
answer
804
views
1
answer
Genome Music for Enhancers and binding sites
enhancer music binding sites written 2.9 years ago by anshupa.vssut • 50 • updated 2.9 years ago by Chris Miller ♦ 21k
2
votes
1
answer
1.6k
views
1
answer
Identify Target genes of an enhancer
enhancer peaks written 3.0 years ago by Bioinformatist Newbie • 230 • updated 2.9 years ago by Giovanni M Dall'Olio ♦ 26k
1
vote
2
answers
831
views
2
answers
Annotate noncoding regions for 1000 genome data
enhancer tfbs snp written 3.0 years ago by qwzhang0601 • 60 • updated 3.0 years ago by Denise - Open Targets • 5.0k
0
votes
0
answers
822
views
0
answers
Benefits of Having Enhancer-Promoter Interactions
prediction gene enhancer interactions promoter written 3.0 years ago by Sama • 50
5
votes
2
answers
1.8k
views
2
answers
Tools to identify enhancers from chromatin marks
enhancer chip-seq tool written 3.0 years ago by guiu • 60 • updated 3.0 years ago by Ryan Dale ♦ 4.8k
2
votes
1
answer
844
views
1
answer
Computational Research Topics in Transcriptional Gene Regulation
gene regulation genomic enhancer transcription written 3.0 years ago by Sama • 50 • updated 3.0 years ago by natasha.sernova • 3.5k
4
votes
2
answers
1.8k
views
2
answers
How to get enhancer region from a single chromosome?
annotation enhancer ucsc rna-seq chromosome written 3.3 years ago by allyson1115ar • 20 • updated 3.3 years ago by natasha.sernova • 3.5k
8
votes
2
answers
1.3k
views
2
answers
Authoritative genomic regions for Promoter and Enhancer of Human genome
enhancer promoter written 3.6 years ago by Shicheng Guo • 7.6k • updated 3.6 years ago by Dan Gaston ♦ 7.1k
0
votes
2
answers
1.9k
views
2
answers
Annotating SNPs for promoter and enhancer regions
enhancer promoter snp written 4.0 years ago by siddharth.sethi5 • 230 • updated 4.0 years ago by Shicheng Guo • 7.6k
0
votes
0
answers
1.1k
views
0
answers
How to find appropriate control regions for gene burden tests on T-cell enhancer regions
enhancer control gene-burden written 4.0 years ago by Vincent Laufer • 1.1k
1
vote
1
answer
1.1k
views
1
answer
Known transcription factor binding sites and enhancer locations in Pigs
enhancer tfbs written 4.2 years ago by Saad Khan • 340 • updated 4.2 years ago by mark.ziemann • 1.2k
2
votes
1
answer
1.1k
views
1
answer
list of enhacer for specific cell line
genome enhancer hg18 written 4.6 years ago by na.cna30 • 0 • updated 4.3 years ago by chemcehn • 180
0
votes
1
answer
1.7k
views
1
answer
Is it typical to find a ~30 bp motif enriched in promoters of ~20 related genes?
chip-seq enhancer promoter motif rna-seq written 4.6 years ago by biostart • 300 • updated 4.6 years ago by RamRS ♦ 22k
8
votes
2
answers
4.7k
views
2
answers
histone mark associated with enhancers
enhancer histone marks written 4.6 years ago by na.cna30 • 0 • updated 4.6 years ago by Ming Tang • 2.5k
3
votes
1
answer
1.6k
views
1
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Request for sites which are not promoter and enhancer as negative data for classifier
negative enhancer promoter chip-seq hg written 4.7 years ago by na.cna30 • 0 • updated 4.7 years ago by aditi.qamra • 260
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