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written 22 months ago by
sey • 10
• updated
22 months ago by
markus.riester • 470
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Recent Replies
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C: DESeq2 pheatmap by genefilter in R by
Friederike ♦ 4.3k
my first guess would be that the error is due to **lack of row.names** for the `anno` object. `an...
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C: How to Calculate FDR in permutation F test by
Denis • 70
Hi! Did you find answers for the questions you asked? To my understanding for each gene you have ...
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A: Cytoscape-gene expression data by
alfonsoolayaabril • 0
Good afternoon, I am trying to do a proteomic analysis of differential expression in Cytoscape. I...
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C: How to change a BAM file so the chromosome identifier is "chr 1" not just "1" by
Devon Ryan ♦ 90k
For those reading this and wondering, "but what about the chromosome names for each read?!?", the...
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C: I need an explanation about Rosetta de novo structure prediction and fragments p by
dokto20m • 0
How did you generate a fragment library from all available structures in databanks?
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C: get GTEx mean expression by tissue by
os4614 • 0
Use the histology viewer to find the tissue type: https://gtexportal.org/home/histologyPage 022...
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C: How to get nuclear and mitochondrial gene sequences ? by
genomax ♦ 68k
Likely. Figure out the exact URL you will need to make using the filter above.
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C: How to change a BAM file so the chromosome identifier is "chr 1" not just "1" by
genomax ♦ 68k
Use `samtools reheader`: reheader samtools reheader Replace the ...
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C: How to get nuclear and mitochondrial gene sequences ? by
kA • 0
No I haven't. Although I should specify that I am trying to write a bash script program which wo...
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C: How to get nuclear and mitochondrial gene sequences ? by
kA • 0
Thanks for the suggestion. Would I be able to do this without installing Entrezdirect ? I would ...
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A: How to use extractfeat to get coding sequences? by
kA • 0
I managed to fix it. I was accidentally using FASTA formatted files instead of Genbank flat file...
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C: DESeq2 pheatmap by genefilter in R by
babasaraki • 0
Sure, will correct that in the future. Was my mistake though being I am new to using this platfor...
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