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Species specific SNPs
phylogeny snp gbs written 7 weeks ago by sebabiokr10
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How to do AMOVA on GBS data
genome R snp gbs written 15 months ago by jaafari.omid50
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Understanding LD with tassel results
gwas linkage disequilibrium tassel ld gbs written 16 months ago by alesierra280 • updated 16 months ago by Biostar ♦♦ 20
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sample ID error in cstacks
cstacks gbs written 19 months ago by sara.razi860
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GBS SNPs calling
fast-gbs gatk snp calling samtools gbs written 3.1 years ago by shinken12380 • updated 21 months ago by Arthur Melo0
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Filter sam/bam files
filter bam samtools sam gbs written 21 months ago by ramesh.8v210 • updated 21 months ago by swbarnes27.5k
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Should PCR duplicates always be removed?
gbs samtools pcr duplicates written 2.8 years ago by jtwalker20 • updated 24 months ago by Biostar ♦♦ 20
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GBS and TASSEL-GBS v2
gbs written 24 months ago by Sam140
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Error uploading VCF file onto Tassel v5
tassel gbs written 2.1 years ago by csjlee0810 • updated 2.1 years ago by RamRS26k
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Genotyping by Sequencing: TASSEL and UNEAK
gbs written 2.2 years ago by shubhra.bhattacharya120 • updated 2.1 years ago by Biostar ♦♦ 20
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Platypus-VCF caller - Segmentation fault (core dumped)
variant calling next-gen platypus gbs written 2.2 years ago by csjlee0810 • updated 2.2 years ago by Kevin Blighe56k
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From pooled fastq data to SNPs
barcode fastq demultiplexing snp gbs written 2.2 years ago by Fedster30 • updated 2.2 years ago by bari.ballew210
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Sequence of GBS tag
marker tassel snp gbs written 2.6 years ago by wdlngtn0
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How to filter a multisample VCF based on individual sample depth?
vcf samtools mpileup gbs written 2.8 years ago by jtwalker20 • updated 2.8 years ago by Pierre Lindenbaum127k
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GBS and RADseq
gbs next-gen radseq sequencing written 2.9 years ago by shynilasanthi30 • updated 2.9 years ago by William4.6k
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VCF file problem
vcf gbs written 3.0 years ago by lessismore770 • updated 3.0 years ago by Manuel Landesfeind1.2k
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