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How to handle hexaploidy of Wheat for vcf file
vcf next-gen gbs written 1 day ago by hafiz.talhamalik240 • updated 1 day ago by JC11k
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Species specific SNPs
phylogeny snp gbs written 5 months ago by sebabiokr10
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How to do AMOVA on GBS data
genome R snp gbs written 19 months ago by jaafari.omid50
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Understanding LD with tassel results
gwas linkage disequilibrium tassel ld gbs written 20 months ago by alesierra280 • updated 20 months ago by Biostar ♦♦ 20
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sample ID error in cstacks
cstacks gbs written 23 months ago by sara.razi860
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GBS SNPs calling
fast-gbs gatk snp calling samtools gbs written 3.5 years ago by shinken12390 • updated 2.1 years ago by Arthur Melo0
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Filter sam/bam files
filter bam samtools sam gbs written 2.1 years ago by ramesh.8v210 • updated 2.1 years ago by swbarnes28.2k
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Should PCR duplicates always be removed?
gbs samtools pcr duplicates written 3.1 years ago by jtwalker20 • updated 2.3 years ago by Biostar ♦♦ 20
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GBS and TASSEL-GBS v2
gbs written 2.3 years ago by Sam140
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Error uploading VCF file onto Tassel v5
tassel gbs written 2.5 years ago by csjlee0810 • updated 2.5 years ago by RamRS28k
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Genotyping by Sequencing: TASSEL and UNEAK
gbs written 2.6 years ago by shubhra.bhattacharya120 • updated 2.5 years ago by Biostar ♦♦ 20
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Platypus-VCF caller - Segmentation fault (core dumped)
variant calling next-gen platypus gbs written 2.5 years ago by csjlee0810 • updated 2.5 years ago by Kevin Blighe63k
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From pooled fastq data to SNPs
barcode fastq demultiplexing snp gbs written 2.5 years ago by Fedster30 • updated 2.5 years ago by bari.ballew230
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Sequence of GBS tag
marker tassel snp gbs written 3.0 years ago by wdlngtn0
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How to filter a multisample VCF based on individual sample depth?
vcf samtools mpileup gbs written 3.1 years ago by jtwalker20 • updated 3.1 years ago by Pierre Lindenbaum129k
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