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126 results • Page
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Herald:
The Biostar Herald for Monday, January 31, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
2
replies
881
views
Herald:
The Biostar Herald for Monday, January 24, 2022
herald
updated 2.3 years ago by
Mensur Dlakic
★ 27k • written 2.3 years ago by
Biostar
2.8k
1
vote
0
replies
535
views
Herald:
The Biostar Herald for Monday, January 17, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
0
replies
572
views
Herald:
The Biostar Herald for Monday, January 10, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
1
reply
740
views
Herald:
The Biostar Herald for Monday, January 03, 2022
herald
updated 2.4 years ago by
Jeremy Leipzig
22k • written 2.4 years ago by
Biostar
2.8k
2
votes
0
replies
591
views
Herald:
The Biostar Herald for Monday, December 06, 2021
herald
2.4 years ago by
Biostar
2.8k
3
votes
0
replies
828
views
Herald:
The Biostar Herald for Tuesday, November 23, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
668
views
Herald:
The Biostar Herald for Monday, November 15, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
613
views
Herald:
The Biostar Herald for Monday, November 08, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
642
views
Herald:
The Biostar Herald for Monday, November 01, 2021
herald
2.5 years ago by
Biostar
2.8k
3
votes
0
replies
704
views
Herald:
The Biostar Herald for Tuesday, October 26, 2021
herald
updated 2.6 years ago by
Istvan Albert
100k • written 2.6 years ago by
Biostar
2.8k
2
votes
0
replies
624
views
Herald:
The Biostar Herald for Wednesday, October 13, 2021
herald
2.6 years ago by
Biostar
2.8k
1
vote
0
replies
646
views
Herald:
The Biostar Herald for Tuesday, October 05, 2021
herald
2.6 years ago by
Biostar
2.8k
3
votes
0
replies
635
views
Herald:
The Biostar Herald for Tuesday, September 21, 2021
herald
2.6 years ago by
Biostar
2.8k
0
votes
0
replies
621
views
Herald:
The Biostar Herald for Tuesday, September 14, 2021
herald
2.7 years ago by
Biostar
2.8k
3
votes
0
replies
646
views
Herald:
The Biostar Herald for Friday, September 03, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
661
views
Herald:
The Biostar Herald for Friday, August 27, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
627
views
Herald:
The Biostar Herald for Tuesday, August 17, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
600
views
Herald:
The Biostar Herald for Tuesday, August 03, 2021
herald
2.8 years ago by
Biostar
2.8k
0
votes
0
replies
624
views
Herald:
The Biostar Herald for Monday, July 26, 2021
herald
2.8 years ago by
Biostar
2.8k
2
votes
0
replies
537
views
Herald:
The Biostar Herald for Tuesday, July 20, 2021
herald
2.8 years ago by
Biostar
2.8k
0
votes
0
replies
567
views
Herald:
The Biostar Herald for Monday, July 12, 2021
herald
2.8 years ago by
Biostar
2.8k
4
votes
0
replies
632
views
Herald:
The Biostar Herald for Friday, July 02, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.8k
2
votes
0
replies
595
views
Herald:
The Biostar Herald for Tuesday, June 15, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.8k
5
votes
0
replies
698
views
Herald:
The Biostar Herald for Tuesday, June 08, 2021
herald
updated 2.9 years ago by
Istvan Albert
100k • written 2.9 years ago by
Biostar
2.8k
7
votes
1
reply
1.0k
views
Herald:
The Biostar Herald for Wednesday, June 02, 2021
herald
updated 3.0 years ago by
Istvan Albert
100k • written 3.0 years ago by
Biostar
2.8k
126 results • Page
3 of 3
Recent Votes
Answer: The total expressed genes in RNA-Seq data
C: Re-arrange conditions in Seurat
Genome Visualization Tools
Comment: Genome Visualization Tools
Answer: RSeQC : infer_experiment.py Error: Could not retrieve index file
A: Best de novo assembler for insect genome ?
Comment: sci-RNA-seq
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Recent Awards •
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Popular Question
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mbrav005
• 0
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Sofia
• 0
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jen
▴ 10
Popular Question
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nitinra
▴ 50
Scholar
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Pierre Lindenbaum
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43k
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bioinfo
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Recent Replies
Comment: Genome Visualization Tools
by
dlera.lozano
▴ 10
Thank you so much
Answer: Doubt about the process of annotation, detection, identification and classificat
by
Mensur Dlakic
★ 27k
Depends on the context. `TE detection` and `TE identification` could mean the same thing if they refer to presence/absence of TEs. `TE iden…
Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
by
Ram
43k
Please accept your own answer to mark the post as solved.
Comment: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Ram
43k
A small educational note: if an answer was helpful, you should upvote it; if the answer resolved your question, you should mark it as accep…
Comment: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Prawesh
• 0
thanks, it's working now.
Comment: Genome Visualization Tools
by
GenoMax
142k
@cmdcolin has a great list here: https://github.com/cmdcolin/awesome-genome-visualization
Answer: RSeQC : infer_experiment.py Error: Could not retrieve index file
by
Trivas
★ 1.8k
You need to have indexed your bam/sam file using `samtools index`
Answer: Using ggplotly in R
by
jared.andrews07
★ 16k
The simple answer is to plot it natively with plotly rather than use `ggplotly`. See [this stackoverflow answer](https://stackoverflow.com/…
Comment: Why does assigning genes with biomart give me different values than using a tran
by
GenoMax
142k
According to HUGO there is only one [**ZSCAN2 gene**][1] and it points to the first Ensembl gene ID (ENSG00000176371). Ensembl is annotatin…
Answer: RNAseq RNA content
by
noodle
▴ 580
There are many tools for this. I recommend [gatk (picard) CollectRnaSeqMetrics][1] or alternatively [RSeQC][2] and then run [multiqc][3…
Comment: Where to get the following bed file?
by
wyuan37
• 0
Hi, I emailed them and did get the bed file! Thank you so much.
Comment: Where to get the following bed file?
by
wyuan37
• 0
Thanks! Super helpful.
Answer: Post-imputation QC for input into GWAS analyses
by
LauferVA
4.2k
1. Imputation algorithms will output log files indicating, among other things, accuracy of imputation. We can't comment on specifics as we …
Comment: Using Cutadapt to trim adapters from paired-end small RNA sequence data
by
GenoMax
142k
You can simply ignore read 2. It is not adding any information since your small RNA's are going to be small and were completely sequenced b…
Comment: Overlapping Ranges within Granges object
by
ntsopoul
▴ 60
does this work with a single .bed file?
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