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126 results • Page
3 of 3
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3
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523
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Herald:
The Biostar Herald for Monday, January 31, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
2
replies
882
views
Herald:
The Biostar Herald for Monday, January 24, 2022
herald
updated 2.3 years ago by
Mensur Dlakic
★ 27k • written 2.3 years ago by
Biostar
2.8k
1
vote
0
replies
535
views
Herald:
The Biostar Herald for Monday, January 17, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
0
replies
572
views
Herald:
The Biostar Herald for Monday, January 10, 2022
herald
2.3 years ago by
Biostar
2.8k
1
vote
1
reply
741
views
Herald:
The Biostar Herald for Monday, January 03, 2022
herald
updated 2.4 years ago by
Jeremy Leipzig
22k • written 2.4 years ago by
Biostar
2.8k
2
votes
0
replies
591
views
Herald:
The Biostar Herald for Monday, December 06, 2021
herald
2.4 years ago by
Biostar
2.8k
3
votes
0
replies
829
views
Herald:
The Biostar Herald for Tuesday, November 23, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
668
views
Herald:
The Biostar Herald for Monday, November 15, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
613
views
Herald:
The Biostar Herald for Monday, November 08, 2021
herald
2.5 years ago by
Biostar
2.8k
1
vote
0
replies
643
views
Herald:
The Biostar Herald for Monday, November 01, 2021
herald
2.5 years ago by
Biostar
2.8k
3
votes
0
replies
705
views
Herald:
The Biostar Herald for Tuesday, October 26, 2021
herald
updated 2.6 years ago by
Istvan Albert
100k • written 2.6 years ago by
Biostar
2.8k
2
votes
0
replies
625
views
Herald:
The Biostar Herald for Wednesday, October 13, 2021
herald
2.6 years ago by
Biostar
2.8k
1
vote
0
replies
646
views
Herald:
The Biostar Herald for Tuesday, October 05, 2021
herald
2.6 years ago by
Biostar
2.8k
3
votes
0
replies
635
views
Herald:
The Biostar Herald for Tuesday, September 21, 2021
herald
2.6 years ago by
Biostar
2.8k
0
votes
0
replies
621
views
Herald:
The Biostar Herald for Tuesday, September 14, 2021
herald
2.7 years ago by
Biostar
2.8k
3
votes
0
replies
646
views
Herald:
The Biostar Herald for Friday, September 03, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
661
views
Herald:
The Biostar Herald for Friday, August 27, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
627
views
Herald:
The Biostar Herald for Tuesday, August 17, 2021
herald
2.7 years ago by
Biostar
2.8k
0
votes
0
replies
600
views
Herald:
The Biostar Herald for Tuesday, August 03, 2021
herald
2.8 years ago by
Biostar
2.8k
0
votes
0
replies
625
views
Herald:
The Biostar Herald for Monday, July 26, 2021
herald
2.8 years ago by
Biostar
2.8k
2
votes
0
replies
538
views
Herald:
The Biostar Herald for Tuesday, July 20, 2021
herald
2.8 years ago by
Biostar
2.8k
0
votes
0
replies
567
views
Herald:
The Biostar Herald for Monday, July 12, 2021
herald
2.8 years ago by
Biostar
2.8k
4
votes
0
replies
632
views
Herald:
The Biostar Herald for Friday, July 02, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.8k
2
votes
0
replies
595
views
Herald:
The Biostar Herald for Tuesday, June 15, 2021
herald
updated 2.9 years ago by
natay
20 • written 2.9 years ago by
Biostar
2.8k
5
votes
0
replies
698
views
Herald:
The Biostar Herald for Tuesday, June 08, 2021
herald
updated 2.9 years ago by
Istvan Albert
100k • written 2.9 years ago by
Biostar
2.8k
7
votes
1
reply
1.0k
views
Herald:
The Biostar Herald for Wednesday, June 02, 2021
herald
updated 3.0 years ago by
Istvan Albert
100k • written 3.0 years ago by
Biostar
2.8k
126 results • Page
3 of 3
Recent Votes
A: ensembl gene id
A: How to deal with the case that one gene symbol matches multiple ensembl ids?
Answer: DESeq2 error
Answer: Using ggplotly in R
Comment: How to calculate coverage of Nanopore long read data?
Answer: In one PCA plot, can I calculate the percentage of different factors that contri
Answer: Calculate allelic frequency from VEP output vcf file
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Recent Awards •
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Scholar
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ramiro.barrantes
• 0
Popular Question
to
AshleeThomson
▴ 80
Popular Question
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vk
▴ 10
Scholar
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Prawesh
• 0
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Jean-Karim Heriche
27k
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Chironex
▴ 40
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rpolicastro
13k
Recent Replies
Answer: scRNAseq quality control weird double curve in nFeature vs nCount plot
by
valdirbarth
▴ 20
Is it possible that the cells that have their VDJ sequenced, those VDJ reads are not contributing to new genes detected? So you might be …
Comment: ggrepel function: geom_text_repel()
by
ntsopoul
▴ 60
The plot looks confusing, chek the documentation there is an attribute called force. If you reduce the value you should get better results.…
Comment: Sequencing Depth (Read Depth) Calculations
by
LucisTheFather
• 0
Understood! Gonna try those two!
Comment: Sequencing Depth (Read Depth) Calculations
by
LucisTheFather
• 0
Thank u very much!
Comment: How to extract cells of different species after mapping with combined genome?
by
GenoMax
142k
You have used the tag `snRNAseq`. I am not familiar with singleron tech but if you have sequence data you may be able to use `xenome` or `b…
Comment: bbmerge (bbmap) ~ error with insert size file output
by
GenoMax
142k
It may be best to go back to the original data and then do `bbmerge.sh` on it to get original insert size estimates (before any operations …
Comment: bbmerge (bbmap) ~ error with insert size file output
by
chrisk
• 0
Hi Brian, Thank you and apologies for the extra future revision works. Out of curiosity we disabled neural networks 'nn=f' and the file o…
Comment: bbmerge (bbmap) ~ error with insert size file output
by
chrisk
• 0
Hi Genomax, This is the thread: https://www.biostars.org/p/9582467/ Cheers, Chris
Comment: Inquiry about deseq2 transformation
by
Chen
• 0
that's helpful, thanks :)
Comment: bbmerge (bbmap) ~ error with insert size file output
by
Brian Bushnell
20k
Ah, this is a little embarrassing; those are the vectors for the neural network. I overloaded a field that was being used for the insert s…
Comment: Annotating file using bcftools
by
kl
▴ 10
Thanks - I corrected it. It doesn't seem to annotate. I converted to binary after which is what is shown below. It is not the output I want…
Comment: Filtering VCF files based on VAF giving incorrect results
by
Arton
▴ 10
These are valid questions. Does your code address the concerns you've raised? From what I understand, FilterVcf is primarily designed for h…
Answer: Calculate allelic frequency from VEP output vcf file
by
ramiro.barrantes
• 0
Found the answer here!! https://github.com/Illumina/strelka/blob/master/docs/userGuide/README.md#somatic Although this leads to a str…
Comment: Using VEP annotation output as the input for a second VEP annotation
by
Ram
43k
That's not a valid reason to delete the post. If that information was sensitive, posting it here was a mistake in the first place. I don't …
Answer: In one PCA plot, can I calculate the percentage of different factors that contri
by
marco.barr
▴ 120
Hi, regardless of how you generated the data whether with DESeq2 or other pipeline, your differential expression matrix can be used as inpu…
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