3 days ago by
info
▴
80
0
votes
0
replies
98
views
Recent Votes
Recent Locations •
All
United States, just now
France/Nantes/Institut du Thorax - INSERM UMR1087, 1 minute ago
United States, 6 minutes ago
Moscow, 7 minutes ago
Whitefish, MT, 14 minutes ago
United Kingdom, 33 minutes ago
United States, 36 minutes ago
Recent Awards •
All
Teacher to
Kevin Blighe
86k
Commentator to
jill.syx
▴
60
Appreciated to
Raony Guimarães
★
1.4k
Popular Question to
Sam
▴
300
Popular Question to
jaredbernard
▴
20
Popular Question to
Tanvir Ahamed
▴
350
Popular Question to
Mr Locuace
▴
150
Recent Replies
Comment: Alternative to Gentrome?
by
cfos4698
▴
920
Could be either a hard-masked reference genome sequence or the decoy reference genome + transcriptome. If it's the latter (which takes much…
Comment: What apps can read large FASTQ files on Windows?
by
Darked89
4.5k
Imho less than 10 reads is good enough to figure out what can be discovered in a FASTQ by a naked eye. Sequence naming convention, formatti…
Comment: Issues while running blastx
by
Foad
▴
10
According to your explanation, i downloaded fasta file and then i used the makeblastdb command, after executing the command, a series of f…
Comment: Insert Size For Illumina Gaiix Paired-End Library From Sam/Bam File
by
tingting
▴
10
java -jar picard/build/libs/picard.jar CollectInsertSizeMetrics \
I=F03_LPS.shifted.sorted.bam \
O=F03_insert_size_metrics.txt \
H=F0…
Answer: Cibersort input data
by
Kaia
•
0
They have specify this in their tutorials. Go to their website and click on menu -- tutorial.
Comment: Translating gene names to entrez id's
by
Wassim Salam
•
0
Hi Kevin, this helped a lot! I am in a situation where there is some keys mismatch between my TxDb and org.db object. I made it work using …
Comment: which statistical test and which package for comapre datasets?
by
satva72
•
0
Thanks for your comment, the main question here is that distribution of snps that we have in different datasets are different or not?! null…
Answer: What's the acceptable threshold in Quality Assessment for Genome Assemblies?
by
liorglic
★
1.3k
I would say that the answer to your question is no, there are no absolute values which would be considered good. The contiguity, completene…
Answer: Tutorials for Spatial Transcriptomics
by
CTLong
▴
50
Personally, when I learn a new technology, I usually play around with the data that had already been generated by previous labs and try to …
Comment: What apps can read large FASTQ files on Windows?
by
ATpoint
78k
Also, as I suggested already here https://bioinformatics.stackexchange.com/questions/21931/how-to-download-sequencing-data-on-windows-using…
Answer: What apps can read large FASTQ files on Windows?
by
size_t
▴
120
As @Sanjukta said, you won't really learn anything new from manually looking at millions of sequences.
If you insist on viewing, you c…
Comment: What apps can read large FASTQ files on Windows?
by
dsull
★
5.1k
Why do you want to open up such a large file in a text editor? You're not really going to learn anything new from manually looking at milli…
Comment: Is interleaved Fastq files the same as interlaced fastq
by
GenoMax
136k
> SPAdes wants interlaced fastq and BWA-MEM wants interleaved fastq
Both programs will accept separate paired-end files. The reads in the …
Comment: which statistical test and which package for comapre datasets?
by
LauferVA
3.8k
@414fa591 this question is in need of clarification, as @rpolicastro has already said.
However, based on what you've written, ***the resea…
Traffic: 1365 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6