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Answer: how to split multi-fasta file into single fasta file named by header
A: How To Split A Multiple Fasta
Comment: Question on how to filter DESeq2 results correctly and use of the results functi
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
Answer: Is it possible to do bedtools multicov across the entire genome?
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These are differentially expressed genes, which are around 15K genes from a total of 30 K genes. Then I follow the clustering protocol as g…
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I solved the issue with using bowtie. But now I am experiencing this issue; > Error in makeGRangesFromDataFrame(., seqinfo = genomeinfo, k…
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Sir, How much time does this server take to give output for 1 pair of proteins as I have submitted several hours ago and it still shows ru…
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Thanks alot :)
Comment: Is it possible to do bedtools multicov across the entire genome?
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Amazing, thank you so much! BW, Amy
Answer: Is it possible to do bedtools multicov across the entire genome?
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GenoMax
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`mosdepth` ([**LINK**][1]) is an excellent/fast alternative. [1]: https://github.com/brentp/mosdepth
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Use `top level` file. See [**README**][1] more information about other files you are referring to. [1]: https://ftp.ebi.ac.uk/en…
Answer: Is it possible to do bedtools multicov across the entire genome?
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Simply use then `bedtools genomecov` with `-d` parameter : https://bedtools.readthedocs.io/en/latest/content/tools/genomecov.html
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Programs do not use all the threads/cores all the time. They will do so during appropriate part of the analysis. As long as you have enable…
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Help me to understand. Is this a clustering analysis of differentially expressed genes or an unsupervised clustering analysis (eg WGCNA)?
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Dear Christy, thanks for your interest in the OMA browser. indeed, there seems to be an issue with listing all the genes of a species. W…
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