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Great comprehensive explanation and overview of the technologies -- with regards to sequencing assays, the one thing I'd add is SNV identif…
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I think that term means slightly different things in different contexts. For example, it's useful to profile mRNA modifications (e.g. m6a) …
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Hi, I met the same problem, have you found the solution?
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Hi @fe3e6f65 ,
In a single sentence, the answer to your question can be summarized as, "*the resolution of a genomic technology refers to …
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Sequencing by hybridization (https://en.wikipedia.org/wiki/Sequencing_by_hybridization ) is likely not giving you single base resolution. B…
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https://bioconductor.org/books/release/OSCA.multisample/using-corrected-values.html
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Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
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You can use the default `adapters.fa` file included in the `resources` folder of [**BBMap suite**][1] (program to use is `bbduk.sh`) or a p…
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Only way to find out is to try. It may work but if it is not going to then you will find that out quick (process would likely crash because…
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Also, there is no mention of adapter sequence so which adapter sequence should i use to remove it from some other reads?
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Also, Do you think i can reproduce at least most part of the data from the paper just on my laptop? It has 4 logical processors (Intel(R) C…
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