10 hours ago by
hophuquy0944
•
0
1
vote
14
replies
613
views
0
votes
4
replies
247
views
8 hours ago by
kilcdincer
▴
10
0
votes
3
replies
222
views
updated 9 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
saifulislam99121
•
0
1
vote
9
replies
195
views
2
votes
2
replies
186
views
updated 20 hours ago by
Ram
43k
•
written 23 hours ago by
txema.heredia
▴
130
1
vote
1
reply
184
views
updated 20 hours ago by
Jordan M Eizenga
▴
460
•
written 11 days ago by
sarumonsus
▴
10
1
vote
4
replies
172
views
0
votes
3
replies
166
views
updated just now by
andres.firrincieli
3.6k
•
written 1 day ago by
mavy
▴
10
0
votes
1
reply
159
views
updated 6 hours ago by
GenoMax
142k
•
written 13 hours ago by
huxiangyulove
•
0
0
votes
1
reply
147
views
0
votes
2
replies
146
views
updated 8 hours ago by
Pierre Lindenbaum
161k
•
written 14 hours ago by
melissachua90
▴
70
1
vote
1
reply
139
views
updated 13 hours ago by
Nyksubuz
▴
20
•
written 1 day ago by
mirwa.zidi93
•
0
0
votes
1
reply
130
views
0
votes
1
reply
78
views
0
votes
0
replies
76
views
22 hours ago by
sainavyav22
•
0
0
votes
0
replies
71
views
0
votes
0
replies
54
views
0
votes
4
replies
51
views
38 minutes ago by
hannes.bongartz
•
0
0
votes
0
replies
47
views
0
votes
0
replies
36
views
updated 3 hours ago by
GenoMax
142k
•
written 3 hours ago by
yura.grabovska
▴
90
Recent Votes
Recent Locations •
All
United States, just now
UK, 1 minute ago
United States, 2 minutes ago
France, 3 minutes ago
Singapore, 3 minutes ago
Bologna, 3 minutes ago
France, 5 minutes ago
Recent Awards •
All
Recent Replies
Comment: how to treat the replicates while performing WGCNA
by
andres.firrincieli
3.6k
> 1) I do not want to merge the MEs rather I asked about replicates, as
> some replicates of same sample are showing different behavior for…
Comment: How to systematically check if a bam file is truncated
by
alanh
▴
170
For more details about what `samtools quickcheck` actually checks for, add a few `-v`'s to the command line.
$ samtools quickcheck -…
Comment: How to handle duplicated genes in TCGA data?
by
Zhenyu Zhang
★
1.2k
Second what is said above, ensembl_id is the unique identifier.
As a good bioinformatics habit, always use unique identifier for your anal…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
It doesn't work. The annotation labels are still in a default fontsize. I cant find a way to set the fontsize.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Yes. The solution to most things with ComplexHeatmap is to play around with parameters.
Comment: Reconstruction of locus, order contigs
by
BATMAN
•
0
I do not want to re-annotate the genome. I ask if there is a way to extract the region aligned with the mauve, in .gbk format.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
Thank you. What exactly do you mean? Changing `ha = rowAnnotation(text = anno_mark(at = mark_at, labels = gene_names_interesting_in_cluster…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Try tweaking the `gp` of the rowAnnotation instead of tweaking the `annotation_name_gp` - that might do the trick.
Comment: Help! Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
I don't understand your comment. What do you mean?
> my idea is not to have to write it down
If you have an alignment already, why can't…
Comment: Details on salmon index
by
Rob
6.6k
Hi Lorenzo,
That is correct. The initial version of salmon used the RapMap index explained above. When we published the selective align…
Comment: Help! Reconstruction of locus, order contigs
by
BATMAN
•
0
Thanks for your reply, my idea is not to have to write it down. What I have is an alignment of the .gbk from the progressiveMauve. It would…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★
2.9k
I did some digging aroumd, no static binary. Plus it seems you need to roll your own program.
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
by
Gabriel R.
★
2.9k
We tested it, however, it does not seem to produce a fast a file of the results or anything that we can easily parse. It produces a CIGAR a…
Comment: zero TPM for many gene including housekeeping when using kallisto
by
ashkan
▴
160
@atpoint yes but for example for the kallisto results I have expression for 2080 genes (transcripts) and the rest are 0 but in my STAR resu…
Comment: In one PCA plot, can I calculate the percentage of different factors that contri
by
marco.barr
▴
130
great team work! why can't you access and do the calculation for the other components too? can't you extract the information from the other…
Traffic: 2644 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6