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<prev • 9,338 results • page 1 of 312 • next >
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my file do not have duplicates, but it still shows duplicate are not allow
R rna-seq written 53 minutes ago by mikysyc2016 • 10
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Building a biologically meaningful design matrix for limma/voom in a large RNASeq experiment
confounding limma rna-seq voom written 7 hours ago by stefanos.bamopoulos • 30
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What are the best tools for visualizing DNA methylation result?
methylation rrbs rna-seq written 10 hours ago by ahmad.moousavi • 40
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2
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69
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stringDB PPI network with Log fold change?
ppi string-db rna-seq written 6 days ago by abdurehmanb • 0 • updated 12 hours ago by liux.bio • 140
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STREAM for identifying cell type
xcell rna-seq cell-type enrichment written 22 hours ago by kanwarjag • 890 • updated 16 hours ago by Kevin Blighe ♦ 21k
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Inferring genotype based on RNA sequnces
rna-seq snp written 2 days ago by omer.k • 20 • updated 17 hours ago by Kevin Blighe ♦ 21k
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132
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5 follow
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Total number of genes in hg38
rna-seq written 1 day ago by Glory Basumata • 0 • updated 17 hours ago by WouterDeCoster ♦ 29k
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1
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How tximport work with gencode transcripts?
R rna-seq written 1 day ago by Sharon • 320 • updated 18 hours ago by Kevin Blighe ♦ 21k
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Matched paired DEA analysis of BRCA samples using TCGAbiolinks, works for paired = FALSE but not paired = TRUE
tcgabiolinks R rna-seq written 1 day ago by aluesley1 • 20
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RSEM build for C. elegans
rna-seq written 1 day ago by Michele Busby • 1.8k • updated 1 day ago by h.mon ♦ 15k
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Job: Job: Bioinformatics Analyst at the University of Virginia, Charlottesville, VA, USA
R chip-seq job rna-seq written 1 day ago by Stephen ♦ 2.6k • updated 1 day ago by genomax ♦ 49k
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What is the optimal read length filter for Kallisto post adapter removal?
kallisto rna-seq written 1 day ago by bipin • 0
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45
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LncRNA isoforms RNA-seq
lncrnas isoforms rna-seq lncrna written 1 day ago by Martin B. • 10
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#Cufflinks# Can I change the tracking id?
rna-seq written 1 day ago by hyeonjin • 0 • updated 1 day ago by cpad0112 ♦ 6.3k
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combine RNA-seq data count and len
rna-seq written 1 day ago by mikysyc2016 • 10 • updated 1 day ago by c.chakraborty • 70
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How can I produce gene level quantification using Salmon pseudo-aligner?
salmon rna-seq gene quantification written 1 day ago by Angelique • 0 • updated 1 day ago by ATpoint • 4.4k
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Filtering reads on the basis of percentage of ambiguous(N's) characters
filter fastq rna-seq written 1 day ago by Varun Gupta • 1000 • updated 1 day ago by Pierre Lindenbaum ♦ 108k
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Error message on cufflinks: ImportError
cufflinks rna-seq written 2 days ago by florian.laforets • 0 • updated 1 day ago by Kevin Blighe ♦ 21k
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Issue with creating table counts using StringTie *without* using a reference annotation file (GTF)
assembly rna-seq written 7 days ago by catglen012 • 0 • updated 1 day ago by h.mon ♦ 15k
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Doing interspecies comparison using publicly deposited RNA-seq data
rna-seq interspecies comparison written 1 day ago by amy.bashir • 80
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6 follow
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How can i do enrichment analysis more precisely for differential expression analysis results ?
rna-seq written 3 days ago by fereshteh • 10
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mRNA-seq quality report (fastQC): Does it mean samples have adapters and should remove duplicates?
adapters duplicates rna-seq fastqc written 2 days ago by salamandra • 130 • updated 2 days ago by Charles Warden ♦ 5.0k
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4
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10 follow
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how to analyze synteny between 4 genomes. please suggest suitable tool
assembly next-gen rna-seq sequencing written 19 days ago by kaurjaimeet911 • 10 • updated 2 days ago by Kevin Blighe ♦ 21k
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RPKM to TPM conversion?
rpkm tpm conversion rna-seq rna written 2 days ago by brieannsobieski • 0
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9 follow
1
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Volcano plot help code
R rna-seq written 9 weeks ago by anasofiamoreira94 • 0 • updated 2 days ago by jordi.planells • 0
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1
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58
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1
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plant long non-coding RNA
rna-seq lncrna written 2 days ago by Sam • 70 • updated 2 days ago by colindaven • 700
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59
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gene IDs in stringtie output
rna-seq written 2 days ago by blooming.daisy333 • 0
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64
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How can I analyze more than two conditions in DESeq2?
deseq2 rna-seq written 2 days ago by Lila M • 380 • updated 2 days ago by Lisa Ha • 40
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5 follow
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Does FDR value change based Fold change cutoff?
R differential expression rna-seq edger statistics written 2 days ago by ravi • 20
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Is it correct if we use htseq counts as raw read counts in DESEq2?
htseqcounts deseq2 rna-seq written 2 days ago by nazaninhoseinkhan • 240 • updated 2 days ago by Devon Ryan ♦ 81k
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