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Is there a software about statistic clean reads length distribution
rna-seq written 1 hour ago by t2g4free • 0 • updated 1 hour ago by Pierre Lindenbaum ♦ 96k
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55
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Gene identifiers in rMATS output
splicing alignment rna-seq written 3 hours ago by cjames.gblock • 0
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1
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102
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1
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#rna-seq 2 tissue, 2 different individual, no replicate, what can i analysis?
rna-seq written 5 hours ago by t2g4free • 0
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0
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64
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0
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Stringtie/gffcompare annotation is missing many transcripts (high sensitivity, low precision)
annotation alignment rna-seq written 5 hours ago by Ace • 0
0
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1
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67
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1
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[DESeq2] Time-Course Experimental design
R time-course rna-seq written 7 hours ago by mioappoggio • 0 • updated 5 hours ago by badribio • 150
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3
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613
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3
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RNAseq problems with tophat
rna-seq written 16 months ago by clizama • 0 • updated 5 hours ago by akhilesh • 0
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67
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0
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TCGA RNAseq files
rna-seq written 6 hours ago by shiyang93 • 10
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51
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Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
batch effects rna-seq random effects written 6 hours ago by Dipro • 0
1
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1
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75
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1
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how to rectify python AttributeError: 'NoneType' object has no attribute 'strip'
rna-seq written 9 hours ago by stafnymd • 0 • updated 7 hours ago by aays • 20
4
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2
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129
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5 follow
2
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Comparison between multiple fasta files in terms of presence or absence of certain sequences
sequence alignment rna-seq written 9 hours ago by Bernhard.T.Werner • 0 • updated 7 hours ago by WouterDeCoster ♦ 20k
4
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2
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157
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6 follow
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number of threads for cufflinks transcript assembly
assembly rna-seq written 13 days ago by hassan giahi • 0 • updated 8 hours ago by colindaven • 260
0
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1
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120
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1
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Cloud Computer Cluster VS Local Compute Cluster for RNAseq analysis
cluster cloud compute rna-seq written 17 hours ago by Chen Mor • 0 • updated 9 hours ago by Jean-Karim Heriche ♦ 11k
0
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72
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0
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AnnotationDbi using UCSC annotation
annotationdbi rna-seq ucsc written 9 hours ago by jadepinket • 10
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61
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Geo data downloading
rna-seq written 9 hours ago by Xmya • 20
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2
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84
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2
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assembly of wheat genome
assembly sequence rna-seq sequencing written 12 hours ago by fatimarasool135 • 0 • updated 11 hours ago by Fabio Marroni • 1.3k
0
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1
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632
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1
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ballgown error: Rows of pData did not seem to be in the same order as the columns of the expression data.
R rna-seq written 7 months ago by jolin0701-dy • 50 • updated 13 hours ago by 584839733 • 0
3
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0
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91
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0
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Tophat2 Vs Hisat2
alignment next-gen rna-seq sequencing written 19 hours ago by poojasethiya • 10
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69
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Visualising Stringtie output
rna-seq written 1 day ago by jessicafitch • 0
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3
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118
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6 follow
3
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Downstream applications of Differential transcript expression
rna-seq written 2 days ago by rmf • 70 • updated 1 day ago by theobroma22 • 790
4
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142
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0
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assessing data quality of matched samples from RNA-seq and WGS
wgs rna-seq written 2 days ago by F • 2.6k • updated 1 day ago by WouterDeCoster ♦ 20k
0
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124
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How to deal with several samples from one individuals in the expression level analysis?
rna-seq written 7 weeks ago by jiaochuan • 0 • updated 1 day ago by Biostar ♦♦ 20
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119
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Draw the phylogeny from RNA-Seq data
phylogeny species tissues treatment rna-seq written 1 day ago by wangdp123 • 60
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2.7k
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2
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Cufflinks - Assigning Transcripts Or Exons
fpkm cufflinks rna-seq written 4.9 years ago by AW • 280 • updated 1 day ago by Biostar ♦♦ 20
0
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118
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RNA-Seq Normalization and Batch Correction
R rna-seq written 1 day ago by Kristin Muench • 170
0
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2
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118
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2
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How to download lincRNAs list (human) from RefSeq database ?
genome gene next-gen rna-seq written 2 days ago by Ashley • 0
0
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107
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Effect of number of treatments on gene expression
rna-seq written 2 days ago by new_bioinfo • 0
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1
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125
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1
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How to find RNASeq V2 RSEM normalized expression values for various cancer studies in order to compare to tumor data from cBioportal?
gene normal tcga control rna-seq written 4 days ago by tsangj15 • 0 • updated 2 days ago by Samuel Brady • 190
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108
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News: Genomic Data Visualization and Interpretation Workshop
ggplot genvisr news R bioconductor rna-seq written 3 days ago by carlopecoraro2 • 460
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69
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0
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Lofreq Error For SNP calling
rna-seq snp written 3 days ago by bandanaschapagain • 10
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67
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0
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Sequence uniformity cov
next-gen rna-seq sequencing written 3 days ago by #### • 130
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