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<prev • 12,260 results • page 1 of 409 • next >
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Extracting important gene with similar expression level from multiple samples
feature extraction rna-seq clustering written 1 hour ago by bharata1803 • 420 • updated 38 minutes ago by piyushjo • 150
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12
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Feature selection for differential analysis
differential analysis rna-seq written 51 minutes ago by wo_li • 0
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176
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Many 35nt reads with N bases in R1(paired-end) when sequencing with Illumina NextSeq
illumina rna-seq qualitycontrol written 4 months ago by mgdrnl • 10 • updated 2 hours ago by Biostar ♦♦ 20
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76
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GenBank accesion number to gene id
rna-seq written 12 hours ago by trumbia • 10 • updated 7 hours ago by piyushjo • 150
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72
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5 follow
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To generate an scRNA counts file using barcodes.tsv, genes.tsv and matrix.mtx file
R rna-seq written 9 hours ago by janejoythomas • 0 • updated 8 hours ago by piyushjo • 150
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6 follow
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Difference In Number Of Reads Using Samtools View And Igv
samtools rna-seq igv written 6.3 years ago by pm2013 • 50 • updated 8 hours ago by Biostar ♦♦ 20
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48
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transcript assembling problem by cufflinks
tool rna-seq written 13 hours ago by kuhelikadas1995 • 0 • updated 12 hours ago by h.mon ♦ 27k
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47
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1
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Bowtie-build - reference genome issue
mirbase rna-seq bowtie written 14 hours ago by chupalav • 0 • updated 13 hours ago by Buffo • 1.6k
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1
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38
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1
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lncRNA-RNA interaction tool
rna-seq written 14 hours ago by BioBaby • 10 • updated 13 hours ago by jared.andrews07 • 2.9k
4
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172
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How to interpret Per sequence GC content module in FastQC for RNA-seq data?
qc gc-content rna-seq fastqc written 7 weeks ago by Arindam Ghosh • 160
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89
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How safe the UCSC is for patients data
rna-seq written 18 hours ago by Sara • 40 • updated 17 hours ago by ATpoint ♦ 21k
4
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2
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109
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2
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Meaningful DE using rpkm values in a RNA-Seq analysis
R sequencing chip-seq rna-seq assembly written 1 day ago by Seq225 • 90 • updated 18 hours ago by c.chakraborty • 140
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94
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Can you choose minimum transcript coverage in salmon
salmon rna-seq written 2 days ago by yryan • 0 • updated 19 hours ago by kristoffer.vittingseerup • 2.2k
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4
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148
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5 follow
4
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Can I perform differential gene expression with samples from Poly-A and Ribo-deplation ?
rna-seq differential expression written 15 days ago by dganiewich • 80
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80
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How to subset fastq data based on leading nt of sequences?
rna-seq written 1 day ago by ddzhangzz • 90 • updated 1 day ago by steve • 2.2k
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1
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117
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1
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Interpreting Hisat2 alignment output
hisat alignment rna-seq written 2 days ago by caranlove • 0 • updated 1 day ago by lakhujanivijay ♦ 4.3k
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49
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Flair error in nanopore data
rna-seq sequencing written 1 day ago by bioinfo_ga • 20
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50
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scRNAseq: How to select your reference dataset for cell type identification
rna rna-seq sequencing written 1 day ago by Solal • 0
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1
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107
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1
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What does the final RNA-Seq library for sequencing by Illumina contain? ss cDNA or ds cDNA?
illumina next-gen pcr rna-seq sequencing written 2 days ago by mor.chalabi • 0 • updated 2 days ago by ATpoint ♦ 21k
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1
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136
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1
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Normalization of allele specific counts in RNA-seq
normalization next-gen rna-seq snp allele-specific written 8 days ago by Ankit • 110
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62
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1
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Ensemble of Gene Set Enrichment Analyses (EGSEA) for count matrix generated by DESeq2 and edgeR packages
egsea deseq2 rna-seq gsea edger written 2 days ago by F. Golestan • 20 • updated 2 days ago by h.mon ♦ 27k
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83
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Pipeline for single RNA seq to work with Python
rna-seq written 2 days ago by B- for bioinformatics • 20
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56
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Highly biased experiment showing funny histogram of p values for all tests. Suggestions?
deseq2 rna-seq filtering written 2 days ago by Mozart • 140
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62
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Kegg result interpretation
gene R statistic rna-seq written 2 days ago by Heinrich_M • 0
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1
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6 follow
1
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Ballgown Error in file(file, "rt") : invalid 'description' argument
ballgown rna-seq written 24 months ago by vinayjrao • 140 • updated 2 days ago by wood • 0
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1
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48
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1
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STAR-Fusion: Problem in interpreting
rna-seq written 2 days ago by Ranan Jyoti Sarma • 40 • updated 2 days ago by lakhujanivijay ♦ 4.3k
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1
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62
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1
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Which axis to look for in PCA plot to understand the sample clustering
pca qc rna-seq clustering written 2 days ago by kousi31 • 0 • updated 2 days ago by swbarnes2 ♦ 6.2k
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152
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inconsistent results of rsem quantification
rsem isoform rna-seq written 7 weeks ago by gnilihzeux • 0 • updated 3 days ago by Biostar ♦♦ 20
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137
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5 follow
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awk extract certain line
rna-seq written 3 days ago by mxlsherry1992 • 30
4
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1
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137
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5 follow
1
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Salmon GC bias with caution
salmon rna-seq written 3 days ago by Morris_Chair • 120 • updated 3 days ago by h.mon ♦ 27k
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