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How to obtain unspliced tRNAs from FASTQ file
next-gen rna-seq unspliced trna written 2 hours ago by nkabo • 50
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How to download TCGA normal sample ?
R tcga rna-seq written 3 hours ago by najioumayma • 10
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100
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How does FastQTL deal with strand
qtl rna-seq written 9 weeks ago by Cindy • 10 • updated 4 hours ago by Biostar ♦♦ 20
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RNA seq analysis ( pre-processing)
R rna-seq written 4 days ago by najioumayma • 10
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48
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Job: Senior Bioinformatician at Biomage
R next-gen job rna-seq written 6 hours ago by vicky • 0
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58
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Very large fastq files from RNA-seq
rna-seq sequencing written 10 hours ago by ramyak1912 • 0 • updated 6 hours ago by i.sudbery ♦ 9.7k
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expression density plot
geo gene expression omnibus rna-seq written 21 hours ago by sindhujarajavelu • 0
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Why might a large number of variants fail HWE?
genome rna-seq snp written 6 days ago by srmeetd • 0 • updated 6 hours ago by i.sudbery ♦ 9.7k
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News: Nanopore direct RNA Sequencing course
news rna-seq nanopore written 7 hours ago by carlopecoraro2 • 1.8k
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SnpSift case control command for multiple samples
snpsift casecontrol next-gen snp rna-seq written 8 hours ago by kumari.indu31 • 0
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Variance Stabilizing Transformation on RNAseqs coming from different studies
wgcna rna-seq vst written 15 hours ago by Andrés Ribone • 0 • updated 14 hours ago by Kevin Blighe ♦ 67k
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Impact of RNAseq read length on non-reference genome alignment
alignment rna-seq written 15 hours ago by rependo • 10
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gogadget use with non-model organism to visualize goseq results
gogadget go go enrichment rna-seq goseq written 20 hours ago by arroyo.sr • 0
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UMIextract giving ValueError: Read sequence: NNNNN is shorter than pattern: NNNNNNNN
umi rna-seq written 22 hours ago by diwasri • 0 • updated 21 hours ago by i.sudbery ♦ 9.7k
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GOseq gene2cat format errors
software error R rna-seq written 1 day ago by et395 • 0
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Perform DEG/FindMarkers within cluster based on gene subset within cluster
R scrna seurat rna-seq written 1 day ago by Dirk • 80 • updated 22 hours ago by jared.andrews07 ♦ 7.9k
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Mapping Grch38 Genomic DNA Positions to RefSeq transcripts
rna-seq written 1 day ago by RNAeye • 60
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2
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100
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Self Organizing Maps for RNA-seq data
rna-seq written 2 days ago by pixie@bioinfo • 1.4k
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Did I do this right? Testing efficiency of poly(A) tailing.
bacteria rna rna-seq polyadenylation written 1 day ago by mss • 30
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How to get the output on multiple files into one file in sbatch script?
rseqc slurm sbtach strand rna-seq written 5 weeks ago by newbie • 90 • updated 1 day ago by Biostar ♦♦ 20
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Knock out genes and TPM
gene alignment next-gen rna-seq gene knock outs written 1 day ago by simang5c • 10
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How to extract upstream and downstream of lncRNA in particular range?
gtf bed rna-seq hommer lncrna written 1 day ago by mathavanbioinfo • 50 • updated 1 day ago by jordi.planells • 270
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How the number of Data effect on my results
rna-seq written 1 day ago by sabaghianamir70 • 10
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5 follow
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Changing chromosome names in BAM files
alignment chip-seq rna-seq written 1 day ago by aodabas20 • 0 • updated 1 day ago by swbarnes2 ♦ 9.1k
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452
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Job: Machine/Deep Learning Research Scientist at UNC Charlotte, NC, USA
statistics python machine learning job R rna-seq written 13 months ago by bigmawen • 340
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Merging previously merged object in Seurat
scrna-seq single-cell seurat rna-seq R written 3 days ago by biostarukha • 10
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259
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Filtering genes with limma-voom
R limma-voom limma rna-seq voom written 1 day ago by im • 0
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How to resolve NAs when annotating a diff gene list with org.Hs.eg.db terms?
ontologies rna-seq go annotations written 6 weeks ago by TonyCN • 30 • updated 1 day ago by Biostar ♦♦ 20
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Help interpretating DESeq2 output
deseq2 foldchange rna-seq written 1 day ago by nanoide • 60 • updated 1 day ago by swbarnes2 ♦ 9.1k
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single-nuclei 10X genomics sequencing metrics
sequence rna-seq written 1 day ago by paria.alipour • 0
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