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SnpSift Annotate replace ID column
snpsift annotation snps snpeff written 5 months ago by Jimbou770 • updated 5 months ago by Nicholas Mancuso70
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Annotate VCF on specific transcripts (ANN field)
vcf snpsift snpeff written 20 months ago by FGV110 • updated 20 months ago by Pierre Lindenbaum129k
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How to use snpSift annotate -info option to annotate specific fields of INFO
snpsift annotation written 20 months ago by MatthewP680 • updated 20 months ago by finswimmer13k
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SnpSift doesn't show any VariantType for filtering
snpsift snpeff filtering mutations written 2.7 years ago by Vasu450 • updated 2.6 years ago by Biostar ♦♦ 20
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multi-sample vcf file filtering
vcf snpsift written 3.1 years ago by rob234king600 • updated 3.1 years ago by Pierre Lindenbaum129k
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SnpSift filtering help
snpsift written 3.4 years ago by eXpander100 • updated 3.4 years ago by Pierre Lindenbaum129k
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filter multiple VCF files using snpSift
snpsift filter vcf written 4.8 years ago by jan130 • updated 3.5 years ago by Biostar ♦♦ 20
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SnpSift annotate outputs invalid files?
software error snpsift snpeff vcf written 4.7 years ago by B0 • updated 3.9 years ago by talushm0
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IGV Visualisation Problem
vcf snpsift vcftools igv written 4.0 years ago by morovatunc460
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Is there a way to reformat vcf 4.2 down to 4.1?
variant calling snpsift snpeff written 4.3 years ago by umn_bist370 • updated 4.3 years ago by harold.smith.tarheel4.6k
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TCGA germline variants status
snpsift vcf tcga sequencing written 4.7 years ago by jan130 • updated 4.3 years ago by echen10
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SnpSift annotate reporting extra alleles not present in the input VCF
snpsift snpeff snp written 5.1 years ago by fwuffy100 • updated 4.5 years ago by Biostar ♦♦ 20
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Filter annotated VCF snpEFF
snpsift vcf snpeff snp filter written 4.5 years ago by hkam10 • updated 4.5 years ago by Nicola Casiraghi450
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Question : Annotating dbNSFP using snpSIFT , problem with index
snpsift dbnsfp written 4.7 years ago by jan130 • updated 4.7 years ago by Philipp Bayer6.7k
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SNPSift - Token Recognition Error
snpsift tokenrecognitionerror written 5.3 years ago by anon12310 • updated 5.1 years ago by Biostar ♦♦ 20
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