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SnpSift Annotate replace ID column
snpsift annotation snps snpeff written 9 months ago by Jimbou800 • updated 9 months ago by Nicholas Mancuso70
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Annotate VCF on specific transcripts (ANN field)
vcf snpsift snpeff written 2.0 years ago by FGV120 • updated 2.0 years ago by Pierre Lindenbaum131k
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How to use snpSift annotate -info option to annotate specific fields of INFO
snpsift annotation written 2.0 years ago by MatthewP820 • updated 2.0 years ago by finswimmer14k
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SnpSift doesn't show any VariantType for filtering
snpsift snpeff filtering mutations written 3.0 years ago by Vasu490 • updated 2.9 years ago by Biostar ♦♦ 20
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multi-sample vcf file filtering
vcf snpsift written 3.4 years ago by rob234king600 • updated 3.4 years ago by Pierre Lindenbaum131k
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SnpSift filtering help
snpsift written 3.7 years ago by eXpander100 • updated 3.7 years ago by Pierre Lindenbaum131k
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filter multiple VCF files using snpSift
snpsift filter vcf written 5.1 years ago by jan130 • updated 3.8 years ago by Biostar ♦♦ 20
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SnpSift annotate outputs invalid files?
software error snpsift snpeff vcf written 5.0 years ago by B0 • updated 4.2 years ago by talushm0
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IGV Visualisation Problem
vcf snpsift vcftools igv written 4.3 years ago by morovatunc460
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Is there a way to reformat vcf 4.2 down to 4.1?
variant calling snpsift snpeff written 4.6 years ago by umn_bist380 • updated 4.6 years ago by harold.smith.tarheel4.6k
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TCGA germline variants status
snpsift vcf tcga sequencing written 5.0 years ago by jan130 • updated 4.6 years ago by echen10
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SnpSift annotate reporting extra alleles not present in the input VCF
snpsift snpeff snp written 5.4 years ago by fwuffy100 • updated 4.8 years ago by Biostar ♦♦ 20
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Filter annotated VCF snpEFF
snpsift vcf snpeff snp filter written 4.8 years ago by hkam10 • updated 4.8 years ago by Nicola Casiraghi450
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Question : Annotating dbNSFP using snpSIFT , problem with index
snpsift dbnsfp written 5.1 years ago by jan130 • updated 5.1 years ago by Philipp Bayer6.8k
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