Showing: snpsiftreset
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Annotate VCF on specific transcripts (ANN field)
vcf snpsift snpeff written 9 months ago by FGV110 • updated 9 months ago by Pierre Lindenbaum122k
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How to use snpSift annotate -info option to annotate specific fields of INFO
snpsift annotation written 9 months ago by MatthewP260 • updated 9 months ago by finswimmer12k
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SnpSift doesn't show any VariantType for filtering
snpsift snpeff filtering mutations written 21 months ago by Vasu370 • updated 20 months ago by Biostar ♦♦ 20
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multi-sample vcf file filtering
vcf snpsift written 2.2 years ago by rob234king580 • updated 2.2 years ago by Pierre Lindenbaum122k
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SnpSift filtering help
snpsift written 2.5 years ago by eXpander100 • updated 2.5 years ago by Pierre Lindenbaum122k
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filter multiple VCF files using snpSift
snpsift filter vcf written 3.9 years ago by jan110 • updated 2.6 years ago by Biostar ♦♦ 20
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SnpSift annotate outputs invalid files?
software error snpsift snpeff vcf written 3.8 years ago by B0 • updated 3.0 years ago by talushm0
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IGV Visualisation Problem
vcf snpsift vcftools igv written 3.1 years ago by morovatunc400
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Is there a way to reformat vcf 4.2 down to 4.1?
variant calling snpsift snpeff written 3.4 years ago by umn_bist330 • updated 3.4 years ago by harold.smith.tarheel4.4k
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TCGA germline variants status
snpsift vcf tcga sequencing written 3.8 years ago by jan110 • updated 3.4 years ago by echen10
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SnpSift annotate reporting extra alleles not present in the input VCF
snpsift snpeff snp written 4.2 years ago by fwuffy60 • updated 3.6 years ago by Biostar ♦♦ 20
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Filter annotated VCF snpEFF
snpsift vcf snpeff snp filter written 3.6 years ago by hkam10 • updated 3.6 years ago by Nicola Casiraghi450
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Question : Annotating dbNSFP using snpSIFT , problem with index
snpsift dbnsfp written 3.9 years ago by jan110 • updated 3.9 years ago by Philipp Bayer6.4k
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SNPSift - Token Recognition Error
snpsift tokenrecognitionerror written 4.4 years ago by anon12310 • updated 4.2 years ago by Biostar ♦♦ 20
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SNPSift Genotype Extraction
snpsift extraction genotype written 4.4 years ago by anon12310 • updated 4.3 years ago by Biostar ♦♦ 20
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Filtering specific genes
snpsift gene filter written 4.6 years ago by basalganglia30
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