Showing: stringtiereset
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Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 2 days ago by Vijay Lakhujani3.1k • updated 2 days ago by Damian Kao15k
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Gffread error: Error (GFaSeqGet): subsequence cannot be larger than...
stringtie gffread rna-seq written 15 months ago by jjrin10 • updated 16 days ago by spriyar0
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Too Many StringTie Genes
stringtie written 26 days ago by gtasource20
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Estimating the abundance of the transcripts and genes using stringtie
stringtie rna-seq written 9 months ago by amy1630 • updated 29 days ago by iraia.munoa10
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How to deal with single transcripts assigned to multiple genes?
stringtie rna-seq hisat2 written 4 weeks ago by antoinefelden20 • updated 29 days ago by RamRS18k
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Proper design for DESeq2 and other RNAseq general questions
stringtie deseq2 rna-seq hisat2 written 4 weeks ago by Stef0 • updated 4 weeks ago by swbarnes24.2k
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FPKM matrix after stringtie using ballgown
stringtie ballgown fpkm rna-seq written 7 weeks ago by Bioinfo270 • updated 7 weeks ago by Adrian Pelin2.2k
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how to find novel genes and transcripts in gffcompare?
stringtie rna-seq gffcompare written 9 months ago by naveenkumarv4020 • updated 3 months ago by geek_y8.7k
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Adding tag XS to HISAT2 sam files perior to StringTie
stringtie alignment samtools rna-seq hisat2 written 3 months ago by Farbod3.2k • updated 3 months ago by Vijay Lakhujani3.1k
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Unknown Stringtie IDs produced when using Ensembl GTF
gtf ensembl stringtie rna-seq written 4 months ago by freuv20 • updated 4 months ago by Emily_Ensembl16k
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Stringtie output files
gtf stringtie rna-seq written 4 months ago by g.e.novakovsky20 • updated 4 months ago by Kevin Blighe30k
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How many genes in RNA seq?
stringtie rna-seq written 4 months ago by ag1805x90
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Stringtie prepDE.py Error line 32
stringtie deseq2 ballgown rna-seq prepde.py written 6 months ago by bryce.kirby0 • updated 5 months ago by Biostar ♦♦ 20
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stringtie merged gtf doesn't give any gene expression columns
stringtie merge rna-seq hisat2 written 5 months ago by Biologist80 • updated 5 months ago by Kevin Blighe30k
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