Showing: stringtiereset
<prev • 103 results • page 1 of 4 • next >
3
votes
2
answers
140
views
2
answers
How to obtain transcript level TPM using stringtie?
stringtie rna-seq written 10 days ago by kousi310 • updated 6 days ago by ruisergioluis20
0
votes
0
answers
107
views
0
answers
3
votes
0
answers
217
views
6 follow
0
answers
Can I ignore these MSTRG genes in downstream analysis (pantherdb.org)?
stringtie deseq2 rna-seq written 11 weeks ago by Fawzi Yassine10 • updated 6 weeks ago by Biostar ♦♦ 20
3
votes
2
answers
197
views
2
answers
Stringtie: use htseq-count or prepDE.py to extract reads?
stringtie deseq2 rna-seq edger written 7 weeks ago by heyang0 • updated 7 weeks ago by ATpoint18k
0
votes
0
answers
166
views
0
answers
1
vote
0
answers
202
views
0
answers
4
votes
2
answers
169
views
2
answers
StringTie strandness of library in dUTP protocol
rnaseq libraryprep stringtie dutp written 10 weeks ago by raquelgarza9540 • updated 10 weeks ago by Juke-342.2k
1
vote
1
answer
172
views
1
answer
0
votes
0
answers
247
views
0
answers
0
votes
0
answers
189
views
0
answers
0
votes
0
answers
1.7k
views
0
answers
0
votes
0
answers
284
views
0
answers
0
votes
1
answer
258
views
1
answer
Problems with the reference genome in Stringtie
stringtie reference genome rna-seq lncrna written 3 months ago by iraia.munoa60 • updated 3 months ago by Devon Ryan90k
6
votes
1
answer
217
views
1
answer
4
votes
2
answers
385
views
2
answers
0
votes
1
answer
481
views
1
answer
1
vote
1
answer
288
views
1
answer
StringTie - Multimapped reads
assembly stringtie rna-seq multi-mapped reads written 5 months ago by sneha108.ss0 • updated 5 months ago by kristoffer.vittingseerup1.8k
2
votes
2
answers
1.9k
views
8 follow
2
answers
1
vote
1
answer
239
views
1
answer
Add double qoutes around transcript_id in gtf file
gtf stringtie rna-seq awk written 5 months ago by BioBaby0 • updated 5 months ago by finswimmer11k
2
votes
1
answer
432
views
1
answer
What's the difference of FPKM generated by htseq and stringtie?
htseq fpkm stringtie written 6 months ago by hxlei61380 • updated 6 months ago by Devon Ryan90k
0
votes
0
answers
242
views
0
answers
0
votes
1
answer
300
views
1
answer
0
votes
1
answer
367
views
1
answer
Hisat2 output for stringtie
stringtie hisat2 written 6 months ago by Sam110 • updated 6 months ago by Vijay Lakhujani4.1k
0
votes
1
answer
457
views
1
answer
Error in running DESeqDataSetFromTximport
tximport R stringtie deseq2 rna-seq written 7 months ago by ankur0 • updated 7 months ago by Devon Ryan90k
2
votes
1
answer
357
views
1
answer
Unable to create file for tximport
tximport stringtie deseq2 rna-seq written 7 months ago by ankur0 • updated 7 months ago by kristoffer.vittingseerup1.8k
3
votes
2
answers
356
views
2
answers
4
votes
0
answers
447
views
6 follow
0
answers
0
votes
1
answer
385
views
1
answer
Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 8 months ago by Vijay Lakhujani4.1k • updated 8 months ago by Damian Kao15k
2
votes
1
answer
626
views
1
answer
1
vote
1
answer
936
views
1
answer
Gffread error: Error (GFaSeqGet): subsequence cannot be larger than...
stringtie gffread rna-seq written 23 months ago by jjrin10 • updated 8 months ago by spriyar10
<prev • 103 results • page 1 of 4 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2045 users visited in the last hour