Showing: stringtiereset
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how to find novel genes and transcripts in gffcompare?
stringtie rna-seq gffcompare written 7 months ago by naveenkumarv4020 • updated 4 weeks ago by geek_y8.7k
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Adding tag XS to HISAT2 sam files perior to StringTie
stringtie alignment samtools rna-seq hisat2 written 7 weeks ago by Farbod3.1k • updated 7 weeks ago by Vijay Lakhujani3.0k
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Unknown Stringtie IDs produced when using Ensembl GTF
gtf ensembl stringtie rna-seq written 8 weeks ago by freuv20 • updated 8 weeks ago by Emily_Ensembl15k
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Stringtie output files
gtf stringtie rna-seq written 9 weeks ago by g.e.novakovsky10 • updated 8 weeks ago by Kevin Blighe25k
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How many genes in RNA seq?
stringtie rna-seq written 10 weeks ago by ag1805x90
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Stringtie prepDE.py Error line 32
stringtie deseq2 ballgown rna-seq prepde.py written 4 months ago by bryce.kirby0 • updated 12 weeks ago by Biostar ♦♦ 20
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stringtie merged gtf doesn't give any gene expression columns
stringtie merge rna-seq hisat2 written 12 weeks ago by Biologist70 • updated 12 weeks ago by Kevin Blighe25k
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Calculating the gene coverage in StringTie
gene stringtie coverage rna-seq written 13 months ago by sjbasu30 • updated 6 months ago by geo.pertea60
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Cuffcompare on the merged GTF file produced by Stringtie
stringtie cufflinks cuffdiff splicing written 16 months ago by seta1000 • updated 7 months ago by Biostar ♦♦ 20
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Estimating the abundance of the transcripts and genes using stringtie
stringtie rna-seq written 7 months ago by amy1630 • updated 7 months ago by Devon Ryan82k
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