Showing: stringtiereset
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Transcriptomic assembly Stringtie
assembly stringtie rna-seq written 11 days ago by Nelislam40 • updated 11 days ago by ATpoint24k
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Stringtie and prepDE
stringtie written 13 days ago by panacotaforcota0 • updated 13 days ago by ATpoint24k
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Stringie output doesn't have any gene names!
stringtie rna-seq written 20 days ago by chahat_u120 • updated 15 days ago by kristoffer.vittingseerup2.4k
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Running prepare.py on remote server
stringtie rna-seq prepde.py written 4 months ago by suneetamodekurty770 • updated 3 months ago by kristoffer.vittingseerup2.4k
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How to obtain transcript level TPM using stringtie?
stringtie rna-seq written 4 months ago by kousi310 • updated 4 months ago by ruisergioluis20
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Can I ignore these MSTRG genes in downstream analysis (pantherdb.org)?
stringtie deseq2 rna-seq written 6 months ago by Fawzi Yassine10 • updated 5 months ago by Biostar ♦♦ 20
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Stringtie: use htseq-count or prepDE.py to extract reads?
stringtie deseq2 rna-seq edger written 5 months ago by heyang0 • updated 5 months ago by ATpoint24k
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StringTie strandness of library in dUTP protocol
rnaseq libraryprep stringtie dutp written 6 months ago by raquelgarza9540 • updated 6 months ago by Juke-342.8k
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Problems with the reference genome in Stringtie
stringtie reference genome rna-seq lncrna written 7 months ago by iraia.munoa70 • updated 7 months ago by Devon Ryan92k
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StringTie - Multimapped reads
assembly stringtie rna-seq multi-mapped reads written 9 months ago by sneha108.ss0 • updated 9 months ago by kristoffer.vittingseerup2.4k
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Add double qoutes around transcript_id in gtf file
gtf stringtie rna-seq awk written 9 months ago by BioBaby10 • updated 9 months ago by finswimmer12k
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