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7
votes
9
replies
1.8k
views
Blastn and Kraken2 short reads clssification
taxonomy blast kraken
updated 10 months ago by 43k • written 10 months ago by ▴ 100
2
votes
2
replies
634
views
Blast reads classification
NGS magicblast blast
updated 11 months ago by 43k • written 11 months ago by ▴ 100
1
vote
8
replies
1.5k
views
BLAST Database error: BLASTDB alias file creation failed. Some referenced files may be missing.
blastdb blast
updated 12 months ago by 43k • written 12 months ago by ▴ 100
2
votes
3
replies
621
views
Convert Accession Numbers in blast HIT output to Full Taxonomy
esearch blast accession taxid
updated 12 months ago by 6.2k • written 12 months ago by ▴ 100
0
votes
3
replies
683
views
Making masked blast db
db blast masking
updated 12 months ago by 15k • written 12 months ago by ▴ 100
4
votes
6
replies
894
views
nt database Blast
Blast
updated 15 months ago by 142k • written 15 months ago by ▴ 100
2
votes
1
reply
601
views
NCBI DB and Taxonomy classification
db.NCBI taxonomic taxonomy
updated 15 months ago by 142k • written 15 months ago by ▴ 100
1
vote
2
replies
700
views
Download all animal genomes in RefSeq
RefSeq
updated 15 months ago by 142k • written 15 months ago by ▴ 100
1
vote
1
reply
504
views
allele frequencies interpretation
bed allele-frequency
updated 13 months ago by 43k • written 17 months ago by ▴ 100
6
votes
5
replies
1.8k
views
Why do I have sequential 100 G (GGGGGGGGGG...) in R2 FastQC report?
FastQC
updated 21 months ago by 3.2k • written 21 months ago by ▴ 100
2
votes
1
reply
924
views
SourceTracker2
OTU sourcetracker2
updated 23 months ago by ▴ 20 • written 2.1 years ago by ▴ 100
5
votes
7
replies
1.0k
views
Is there a way to expand RAM or CPU?
RAM PC workstation memory
updated 23 months ago by 14k • written 23 months ago by ▴ 100
6
votes
8
replies
1.7k
views
6 follow
PCA for BIG DATA
R PCA
23 months ago by Giulia.cosenza ▴ 100
1
vote
1
reply
566
views
Help me with bacteria classification
Bacteria sra NCBI
updated 23 months ago by 100k • written 23 months ago by ▴ 100
5
votes
5
replies
956
views
Do you know where to find the isolation source of all bacteria?
isolation bacteria
24 months ago by Giulia.cosenza ▴ 100
2
votes
4
replies
776
views
Microorganisms source isolation
bacteria NCBI taxonomy metadata isolation
24 months ago by Giulia.cosenza ▴ 100
0
votes
1
reply
558
views
Find Allele frequencies
snp allele frequencies variants vcf
updated 2.0 years ago by ▴ 910 • written 2.1 years ago by ▴ 100
1
vote
6
replies
1.1k
views
Problem with adapters and taxonomy
taxonomy adapters kraken
updated 2.0 years ago by 100k • written 2.0 years ago by ▴ 100
7
votes
5
replies
812
views
New Work Station for the Lab
workstation pc computer
updated 2.1 years ago by 54k • written 2.1 years ago by ▴ 100
1
vote
0
replies
370
views
Help with taxonomy
taxonomy kraken
2.1 years ago by Giulia.cosenza ▴ 100
2
votes
5
replies
879
views
Is there a genetic map with centimorgan distance of all SNPs hg19
snps recombination map centimorgan
updated 2.1 years ago by 43k • written 2.1 years ago by ▴ 100
3
votes
8
replies
1.8k
views
make a BED file with exons only
exons exon BED
updated 2.1 years ago by ▴ 10 • written 2.1 years ago by ▴ 100
7
votes
9
replies
2.7k
views
6 follow
make a BED file with exons only
vcf exons exon BED
updated 3 months ago by ▴ 290 • written 2.1 years ago by ▴ 100
2
votes
1
reply
402
views
Intronic gVCF
vcf introne intronic hg19
updated 2.1 years ago by 6.2k • written 2.1 years ago by ▴ 100
0
votes
0
replies
321
views
ExAC dataset by GnomAD
vcf intron snp exome
2.1 years ago by Giulia.cosenza ▴ 100
2
votes
3
replies
707
views
gVCF hg19
rs VCF hg19
2.1 years ago by Giulia.cosenza ▴ 100
1
vote
1
reply
485
views
rs#### or SNP-###
vcf snp rs
updated 2.1 years ago by 161k • written 2.1 years ago by ▴ 100
0
votes
0
replies
284
views
'Genogeographer' package, problem with 'profile_AA_x0' function
Genogeographer r Rstudio profile_AAx0
2.3 years ago by Giulia.cosenza ▴ 100
0
votes
5
replies
1.3k
views
Problems with consensus fasta
bed bcftools samtools
updated 13 months ago by 43k • written 2.4 years ago by ▴ 100
0
votes
0
replies
557
views
bcftools consensus -m file.bed error
bed bcftools samtools consensus
updated 13 months ago by 43k • written 2.4 years ago by ▴ 100
1
vote
1
reply
1.9k
views
bcftools consensus
bcftools heterozygous fasta mpileup consensus
updated 2.4 years ago by 100k • written 2.5 years ago by ▴ 100
31 results • Page 1 of 1
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