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Comment: Comment: Is it possible to create gene enrichment plot for wild type (only one type of sa
6 weeks ago by khq5801 ▴ 10
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2
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296
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Is it possible to create gene enrichment plot for wild type (only one type of sample)
enrichment gene-ontology GO
6 weeks ago by khq5801 ▴ 10
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vote
1
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209
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Which software should I use to perform Gene Enrichment Analysis for miRNA targets?
GO targets enrichment miRNA ontology
updated 7 weeks ago by 2.8k • written 7 weeks ago by ▴ 10
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189
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Homology search of miRNA using ncbi-blast+ standalone application?
miRBase blast database homology
updated 8 weeks ago by 34k • written 8 weeks ago by ▴ 10
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268
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Comment: Comment: How to find the read counts of sequences present in a file?
8 weeks ago by khq5801 ▴ 10
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2
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268
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How to find the read counts of sequences present in a file?
NGS blastn miRBase miRNA readcount
8 weeks ago by khq5801 ▴ 10
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1
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423
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Comment: Comment: How to obtain read count in the output file in ncbi-blast+ standalone applicatio
9 weeks ago by khq5801 ▴ 10
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4
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423
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How to obtain read count in the output file in ncbi-blast+ standalone application
miRBase NGS miRNA ncbi-blast
updated 9 weeks ago by 125k • written 10 weeks ago by ▴ 10
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3
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373
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How can I create plot for unique and redundant miRNA using ggplot?
R ggplot mirna graph
updated 5 months ago by ▴ 590 • written 5 months ago by ▴ 10
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373
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Comment: Comment: How can I create plot for unique and redundant miRNA using ggplot?
5 months ago by khq5801 ▴ 10
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218
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How can I remove tRNA, rRNA, snoRNA from the NGS miRNA sample using RFAM
rRNA tRNA RFAM mirna
6 months ago by khq5801 ▴ 10
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1
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507
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How to overcome an error (WARNING: vrna_fold_compound@data_structures.c: sequence length must be greater 0) while using mireap
mireap mirna novelmirna
6 months ago by khq5801 ▴ 10
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0
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507
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Answer: Answer: How to overcome an error (WARNING: vrna_fold_compound@data_structures.c: sequenc
6 months ago by khq5801 ▴ 10
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1
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358
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How can I generate the map.txt file require to detect novel miRNA using miReap
map.text miRNA miRDeep miReap
6 months ago by khq5801 ▴ 10
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0
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358
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Answer: Answer: How can I generate the map.txt file require to detect novel miRNA using miReap
6 months ago by khq5801 ▴ 10
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0
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199
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How to detect novel miRNA using mireap
mireap mirbase mirna
6 months ago by khq5801 ▴ 10
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1
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282
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How to identify conserved and novel miRNA
mirna novel mirbase blastn miRNA conserved
updated 6 months ago by 125k • written 6 months ago by ▴ 10
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3
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347
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How to find the total number of reads using CD-HIT
perl NGS miRNA CD-HIT
updated 6 months ago by ★ 22k • written 6 months ago by ▴ 10
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1
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347
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Comment: Comment: How to find the total number of reads using CD-HIT
6 months ago by khq5801 ▴ 10
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0
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346
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Comment: Comment: How to remove miRNA duplicates and obtain read count
6 months ago by khq5801 ▴ 10
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2
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346
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How to remove miRNA duplicates and obtain read count
miRNA CD-HIT-DUP NGS CD-HIT
6 months ago by khq5801 ▴ 10
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1
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214
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Data extraction from blastn aligned hit
blastn R bioperl perl ubuntu
updated 7 months ago by 125k • written 7 months ago by ▴ 10
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1.3k
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Answer: Answer: novel miRNA identification from sequence
7 months ago by khq5801 ▴ 10
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0
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178
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How to analyze the mirbase mature sequence aligned miRNA output file
mirbase NGS miRNA data-analysis ncbi-blast
updated 6 months ago by 37k • written 7 months ago by ▴ 10
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