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648
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Comment:
Comment: Is it possible to create gene enrichment plot for wild type (only one type of sa
21 months ago by
khq5801
▴ 10
1
vote
2
replies
648
views
Is it possible to create gene enrichment plot for wild type (only one type of sample)
enrichment
gene-ontology
GO
21 months ago by
khq5801
▴ 10
1
vote
1
reply
632
views
Which software should I use to perform Gene Enrichment Analysis for miRNA targets?
GO
targets
enrichment
miRNA
ontology
updated 22 months ago by
Hamid Ghaedi
3.2k • written 22 months ago by
khq5801
▴ 10
0
votes
0
replies
413
views
Homology search of miRNA using ncbi-blast+ standalone application?
miRBase
blast
database
homology
updated 22 months ago by
h.mon
35k • written 22 months ago by
khq5801
▴ 10
0
votes
0
replies
717
views
Comment:
Comment: How to find the read counts of sequences present in a file?
22 months ago by
khq5801
▴ 10
1
vote
2
replies
717
views
How to find the read counts of sequences present in a file?
NGS
blastn
miRBase
miRNA
readcount
22 months ago by
khq5801
▴ 10
0
votes
1
reply
1.1k
views
Comment:
Comment: How to obtain read count in the output file in ncbi-blast+ standalone applicatio
22 months ago by
khq5801
▴ 10
1
vote
4
replies
1.1k
views
How to obtain read count in the output file in ncbi-blast+ standalone application
miRBase
NGS
miRNA
ncbi-blast
updated 22 months ago by
GenoMax
146k • written 22 months ago by
khq5801
▴ 10
3
votes
3
replies
726
views
How can I create plot for unique and redundant miRNA using ggplot?
R
ggplot
mirna
graph
updated 2.1 years ago by
Trivas
★ 1.8k • written 2.1 years ago by
khq5801
▴ 10
0
votes
1
reply
726
views
Comment:
Comment: How can I create plot for unique and redundant miRNA using ggplot?
2.1 years ago by
khq5801
▴ 10
0
votes
0
replies
522
views
How can I remove tRNA, rRNA, snoRNA from the NGS miRNA sample using RFAM
rRNA
tRNA
RFAM
mirna
2.2 years ago by
khq5801
▴ 10
1
vote
1
reply
794
views
How to overcome an error (WARNING: vrna_fold_compound@data_structures.c: sequence length must be greater 0) while using mireap
mireap
mirna
novelmirna
2.2 years ago by
khq5801
▴ 10
1
vote
0
replies
794
views
Answer:
Answer: How to overcome an error (WARNING: vrna_fold_compound@data_structures.c: sequenc
2.2 years ago by
khq5801
▴ 10
0
votes
1
reply
642
views
How can I generate the map.txt file require to detect novel miRNA using miReap
map.text
miRNA
miRDeep
miReap
2.2 years ago by
khq5801
▴ 10
0
votes
0
replies
642
views
Answer:
Answer: How can I generate the map.txt file require to detect novel miRNA using miReap
2.2 years ago by
khq5801
▴ 10
0
votes
0
replies
440
views
How to detect novel miRNA using mireap
mireap
mirbase
mirna
2.2 years ago by
khq5801
▴ 10
2
votes
1
reply
604
views
How to identify conserved and novel miRNA
mirna
novel
mirbase
blastn
miRNA
conserved
updated 2.2 years ago by
GenoMax
146k • written 2.2 years ago by
khq5801
▴ 10
0
votes
3
replies
772
views
How to find the total number of reads using CD-HIT
perl
NGS
miRNA
CD-HIT
updated 2.2 years ago by
Mensur Dlakic
★ 28k • written 2.2 years ago by
khq5801
▴ 10
0
votes
1
reply
772
views
Comment:
Comment: How to find the total number of reads using CD-HIT
2.2 years ago by
khq5801
▴ 10
0
votes
0
replies
748
views
Comment:
Comment: How to remove miRNA duplicates and obtain read count
2.2 years ago by
khq5801
▴ 10
1
vote
2
replies
748
views
How to remove miRNA duplicates and obtain read count
miRNA
CD-HIT-DUP
NGS
CD-HIT
2.2 years ago by
khq5801
▴ 10
1
vote
1
reply
515
views
Data extraction from blastn aligned hit
blastn
R
bioperl
perl
ubuntu
updated 2.3 years ago by
GenoMax
146k • written 2.3 years ago by
khq5801
▴ 10
0
votes
0
replies
1.7k
views
Answer:
Answer: novel miRNA identification from sequence
2.3 years ago by
khq5801
▴ 10
0
votes
0
replies
405
views
How to analyze the mirbase mature sequence aligned miRNA output file
mirbase
NGS
miRNA
data-analysis
ncbi-blast
updated 2.2 years ago by
Ram
44k • written 2.3 years ago by
khq5801
▴ 10
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