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Comment: C: uneven paired end reads in bowtie
7.4 years ago by blur ▴ 280
0
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2
replies
4.4k
views
Answer: A: uneven paired end reads in bowtie
7.4 years ago by blur ▴ 280
0
votes
1
reply
4.4k
views
Answer: A: uneven paired end reads in bowtie
7.4 years ago by blur ▴ 280
0
votes
1
reply
4.4k
views
Answer: A: uneven paired end reads in bowtie
7.4 years ago by blur ▴ 280
0
votes
0
replies
1000
views
Problems setting up cutadapt
cutadapt
7.5 years ago by blur ▴ 280
0
votes
1
reply
3.6k
views
How do I find an example of how to calculate FPKM with cufflinks?
cufflinks fpkm
updated 7.5 years ago by ★ 5.2k • written 7.5 years ago by ▴ 280
1
vote
1
reply
2.8k
views
bcftools soft filters (-s)
bcftools filters
updated 7.5 years ago by 161k • written 7.5 years ago by ▴ 280
7
votes
7
replies
2.5k
views
Bcftools magic string
bcftools
updated 7.5 years ago by 14k • written 7.5 years ago by ▴ 280
0
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1
reply
2.5k
views
Comment: C: Bcftools magic string
7.5 years ago by blur ▴ 280
0
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0
replies
2.5k
views
Comment: C: problem creating PDF file in R(guitar package)
7.5 years ago by blur ▴ 280
1
vote
3
replies
2.5k
views
problem creating PDF file in R(guitar package)
R; Guitar
7.5 years ago by blur ▴ 280
6
votes
5
replies
1.8k
views
NGS tutorials (RNA)
NGS
updated 7.5 years ago by 13k • written 7.5 years ago by ▴ 280
2
votes
5
replies
2.4k
views
PE reads uneven after cutadapt
fastx bowtie
updated 7.5 years ago by 14k • written 7.5 years ago by ▴ 280
0
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0
replies
3.5k
views
Comment: C: determining read depth for every position in a sequence
7.5 years ago by blur ▴ 280
4
votes
3
replies
3.5k
views
determining read depth for every position in a sequence
RNA samtools read depth
updated 7.5 years ago by ★ 1.2k • written 7.5 years ago by ▴ 280
0
votes
2
replies
2.1k
views
Comment: C: Bowtie2 have low global alignment rates in RNA-seq
7.5 years ago by blur ▴ 280
0
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1
reply
2.1k
views
Comment: C: Bowtie2 have low global alignment rates in RNA-seq
7.5 years ago by blur ▴ 280
1
vote
6
replies
2.1k
views
Bowtie2 have low global alignment rates in RNA-seq
eCLIP BOWTIE2
7.5 years ago by blur ▴ 280
0
votes
1
reply
2.5k
views
Comment: C: MACS2 and duplicates
7.5 years ago by blur ▴ 280
1
vote
3
replies
2.5k
views
MACS2 and duplicates
macs2
7.5 years ago by blur ▴ 280
0
votes
0
replies
1.3k
views
Comment: C: cutadapt -o versus >
7.6 years ago by blur ▴ 280
0
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1
reply
1.3k
views
Comment: C: cutadapt -o versus >
7.6 years ago by blur ▴ 280
2
votes
4
replies
1.3k
views
cutadapt -o versus >
cutadapt
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 280
3
votes
3
replies
3.6k
views
trim_galore finds a different adaptor than the one I expected...
trim galore
updated 7.6 years ago by ★ 4.9k • written 7.6 years ago by ▴ 280
0
votes
0
replies
3.6k
views
Comment: C: trim_galore finds a different adaptor than the one I expected...
7.6 years ago by blur ▴ 280
0
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1
reply
1.9k
views
Comment: C: UCSC peak calling - weird results
7.6 years ago by blur ▴ 280
0
votes
3
replies
1.9k
views
UCSC peak calling - weird results
ucsc peak-calling
updated 7.6 years ago by ★ 5.2k • written 7.6 years ago by ▴ 280
0
votes
0
replies
2.2k
views
Comment: C: FASTX error - quality score
7.6 years ago by blur ▴ 280
0
votes
2
replies
2.2k
views
FASTX error - quality score
FASTX
7.6 years ago by blur ▴ 280
3
votes
2
replies
947
views
keeping trimmed edges
trimming
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 280
1
vote
1
reply
4.2k
views
Bam to WIG
bam
7.6 years ago by blur ▴ 280
1
vote
4
replies
14k
views
R1 and R2 in sequencing data
NGS
updated 7.6 years ago by ▴ 120 • written 7.6 years ago by ▴ 280
0
votes
0
replies
14k
views
Comment: C: R1 and R2 in sequencing data
7.6 years ago by blur ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
7.6 years ago by blur ▴ 280
0
votes
1
reply
1.5k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
7.6 years ago by blur ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
7.6 years ago by blur ▴ 280
6
votes
7
replies
1.5k
views
picard-tool markduplicate gets stuck in traversing
picard tools
7.6 years ago by blur ▴ 280
0
votes
0
replies
8.6k
views
Comment: C: How do I find unmapped reads in my sam file?
7.6 years ago by blur ▴ 280
0
votes
1
reply
8.6k
views
Comment: C: How do I find unmapped reads in my sam file?
7.6 years ago by blur ▴ 280
1
vote
5
replies
8.6k
views
How do I find unmapped reads in my sam file?
SAM
updated 7.6 years ago by ▴ 690 • written 7.6 years ago by ▴ 280
0
votes
4
replies
1.4k
views
is there a DB for illumina adaptors/contamination?
sequencing RNA-Seq
updated 7.7 years ago by 47k • written 7.7 years ago by ▴ 280
0
votes
0
replies
1.3k
views
A question about cutadapt
cutadapt RNA-Seq
7.7 years ago by blur ▴ 280
5
votes
1
reply
3.2k
views
where can I find more data about --outSAMattributes All?
RNA-Seq rna-seq samtools STAR
updated 7.7 years ago by 161k • written 7.7 years ago by ▴ 280
0
votes
7
replies
2.5k
views
samtools mpileup giving QUAL of 0
vcf mpileup samtools
updated 22 months ago by 43k • written 9.1 years ago by ▴ 280
0
votes
1
reply
2.5k
views
Comment: Comment: samtools mpileup giving QUAL of 0
updated 22 months ago by 43k • written 9.1 years ago by ▴ 280
0
votes
1
reply
2.5k
views
Comment: C: samtools mpileup giving QUAL of 0
9.1 years ago by blur ▴ 280
0
votes
1
reply
2.5k
views
Comment: C: samtools mpileup giving QUAL of 0
9.1 years ago by blur ▴ 280
0
votes
1
reply
18k
views
Comment: Comment: SNP call using bcftools
updated 22 months ago by 43k • written 9.1 years ago by ▴ 280
0
votes
0
replies
18k
views
Comment: C: SNP call using bcftools
9.1 years ago by blur ▴ 280
0
votes
1
reply
18k
views
Comment: Comment: SNP call using bcftools
updated 22 months ago by 43k • written 9.1 years ago by ▴ 280
206 results • Page 4 of 5
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