Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.5k
views
Comment: Comment: Differential gene expression (aiming to create heatmap) for raw RNAseq count dat
11 months ago by Chirag Parsania ★ 2.0k
2
votes
0
replies
1.8k
views
Comment: Comment: How to make line graph with circles in R
2.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
545
views
miRNA KD/KO data in public domain
public-data miRNA
2.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
848
views
Comment: Comment: Fungal database or gene catalog
2.4 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
672
views
Tool: FungiExpresZ: an intuitive package for fungal gene expression data analysis, visualization and discovery
r gene-expression RNA-seq fungi
updated 2.4 years ago by 45k • written 2.4 years ago by ★ 2.0k
0
votes
0
replies
6.9k
views
Comment: Comment: Write excel file formatted as Table in R
2.9 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
3.3k
views
Answer: Answer: Filter genes of interest from GTF file on R
3.3 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.8k
views
Comment: Comment: biomart and rtracklayer
3.3 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
847
views
Comment: Comment: How to visualize ranked gene expression across samples for RNA-seq?
3.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.5k
views
Comment: Comment: generate all combinations of strings from regular expression in R
3.6 years ago by Chirag Parsania ★ 2.0k
1
vote
2
replies
1.5k
views
generate all combinations of strings from regular expression in R
regularexpression R
3.6 years ago by Chirag Parsania ★ 2.0k
3
votes
1
reply
1.1k
views
Bioconductor package specific website
Bioconductor Rstats R
updated 4.0 years ago by ★ 1.2k • written 4.0 years ago by ★ 2.0k
5
votes
2
replies
954
views
NCBI genome stats
genome stats ncbi
updated 4.3 years ago by 152k • written 4.3 years ago by ★ 2.0k
0
votes
0
replies
1.4k
views
Comment: C: Looking for Bioinformatician in Neuroscience to PORT Polish Center for Technolog
4.9 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
2.4k
views
Comment: C: Gene Ontology Database
4.9 years ago by Chirag Parsania ★ 2.0k
0
votes
2
replies
2.2k
views
Comment: C: Get summary of aligned sequences
5.2 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
2.2k
views
Comment: C: Get summary of aligned sequences
5.2 years ago by Chirag Parsania ★ 2.0k
1
vote
6
replies
2.2k
views
Get summary of aligned sequences
sequence alignment fasta
5.2 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.1k
views
Comment: C: plot tss profile
5.2 years ago by Chirag Parsania ★ 2.0k
5
votes
0
replies
1.3k
views
Tool: TidyWrappers : an R package to deal with an object tbl
ChIP-Seq wrappers R RNA-Seq gene-expression
updated 2.1 years ago by 45k • written 5.2 years ago by ★ 2.0k
1
vote
0
replies
973
views
Comment: C: Empty .fa file after fa_some_records
5.2 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
2.8k
views
Comment: C: Reading a tab separated file
5.2 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.2k
views
Comment: C: Removal of sequences that is partial of a longer sequences in multifasta file
5.2 years ago by Chirag Parsania ★ 2.0k
2
votes
1
reply
3.6k
views
Answer: A: Qcov Vs QcovHSP
5.2 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
4.3k
views
Comment: C: FASTA file split
5.3 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.3k
views
Comment: C: How to get the response variable from gbm model when train.fraction is <1 ?
5.3 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
1.6k
views
Comment: C: NGSseq heatmap RStudio
5.3 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
2.5k
views
Comment: C: How to check quality of multiple sequence alignment (MSA)?
5.4 years ago by Chirag Parsania ★ 2.0k
1
vote
3
replies
2.5k
views
How to check quality of multiple sequence alignment (MSA)?
MSA multiple-sequence-alignment R
updated 2.2 years ago by 45k • written 5.4 years ago by ★ 2.0k
1
vote
1
reply
2.0k
views
Answer: Answer: How to check for the presence/absence of unique rows in two different matrices?
5.4 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
5.4k
views
Answer: A: How to get Taxonomy and Taxon ID for an Accession number using R/Python?
5.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
11k
views
Comment: C: MrBayes: Implementing the LG model
5.5 years ago by Chirag Parsania ★ 2.0k
3
votes
1
reply
4.4k
views
Answer: A: Is there any differences between tophat, cufflinks command with and without GTF
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
1
reply
5.1k
views
Comment: C: Should I filter my reads before running bedtools multicov ?
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
1
reply
5.1k
views
Comment: C: Should I filter my reads before running bedtools multicov ?
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
0
replies
2.0k
views
Answer: A: Data Vizualization or Pathway Analysis
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
1
vote
1
reply
1.9k
views
Answer: A: Obtaining nucleotide sequences from a set of protein identifiers
5.6 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
9.3k
views
Comment: C: How to find intron co-ordinates from the gff file?
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
1
reply
9.3k
views
Comment: C: How to find intron co-ordinates from the gff file?
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
0
replies
9.3k
views
Comment: C: How to find intron co-ordinates from the gff file?
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
0
replies
2.7k
views
Comment: C: Data with only 1 pair for DEG analysis
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
1
reply
2.7k
views
Comment: C: Data with only 1 pair for DEG analysis
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
0
votes
1
reply
2.7k
views
Answer: A: Data with only 1 pair for DEG analysis
updated 5.6 years ago by 45k • written 9.7 years ago by ★ 2.0k
1
vote
1
reply
9.0k
views
Comment: C: Plotting a line graph using the ggplot2 for multiple columns (genes)
5.6 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
9.0k
views
Comment: C: Plotting a line graph using the ggplot2 for multiple columns (genes)
5.6 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
3.0k
views
Answer: A: Extract sequences consecutively from a large fasta files and save in new fasta f
5.7 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.5k
views
Comment: C: Mapping common identifiers between two files
5.7 years ago by Chirag Parsania ★ 2.0k
6
votes
2
replies
2.0k
views
Answer: A: How can I separate column names in to different columns to perform downstream an
5.7 years ago by Chirag Parsania ★ 2.0k
8
votes
1
reply
24k
views
Answer: C: Could you please explain Fold change, % of change, and log2 fold change (L2FC) t
5.7 years ago by Chirag Parsania ★ 2.0k
2
votes
1
reply
2.6k
views
Answer: C: ggplot density plot across bed file
updated 5.8 years ago by 12k • written 5.8 years ago by ★ 2.0k
228 results • Page 1 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6