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Comment: Comment: Cutadapt installation issues
updated 6.0 years ago by 45k • written 10.2 years ago by ▴ 110
0
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1
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12k
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Comment: C: Cutadapt installation issues
updated 6.0 years ago by 45k • written 10.2 years ago by ▴ 110
2
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3
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3.8k
views
Tools to find overlapping/common interactions between two networks
networks overlap
updated 3.2 years ago by 45k • written 10.1 years ago by ▴ 110
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0
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5.5k
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Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
7.8 years ago by Naresh D J ▴ 110
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0
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5.5k
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Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
7.8 years ago by Naresh D J ▴ 110
4
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7
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5.5k
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How to get counts data for allele specific expression analysis (ASE) from aligned bam files (RNA-seq data)?
RNA-Seq SNP ASE vcf
updated 7.8 years ago by ★ 2.0k • written 7.9 years ago by ▴ 110
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0
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5.5k
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Answer: A: How to get counts data for allele specific expression analysis (ASE) from aligne
7.8 years ago by Naresh D J ▴ 110
0
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0
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5.5k
views
Comment: C: How to get counts data for allele specific expression analysis (ASE) from aligne
7.9 years ago by Naresh D J ▴ 110
0
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4
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2.3k
views
How to map/align fastq sequences to scrambled sequences and quantify them
alignment next-gen sequence
8.3 years ago by Naresh D J ▴ 110
0
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0
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2.3k
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Comment: C: How to map/align fastq sequences to scrambled sequences
8.3 years ago by Naresh D J ▴ 110
0
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0
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2.3k
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Comment: C: How to map/align fastq sequences to scrambled sequences
8.3 years ago by Naresh D J ▴ 110
0
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1
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2.5k
views
Comment: C: Where to download processed time course RNA-seq data in human?
9.1 years ago by Naresh D J ▴ 110
1
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6
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2.5k
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Where to download processed time course RNA-seq data in human?
RNA-Seq R
updated 9.1 years ago by ▴ 890 • written 9.1 years ago by ▴ 110
0
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1
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2.5k
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Comment: C: Where to download processed time course RNA-seq data in human?
9.1 years ago by Naresh D J ▴ 110
0
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0
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2.6k
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Comment: C: design matrix for complicated experimental design in limma
9.3 years ago by Naresh D J ▴ 110
0
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0
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2.6k
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Comment: C: design matrix for complicated experimental design in limma
9.3 years ago by Naresh D J ▴ 110
0
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4
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2.6k
views
design matrix for complicated experimental design in limma
rna-seq microarray limma
updated 9.3 years ago by 105k • written 9.3 years ago by ▴ 110
14
votes
5
replies
5.2k
views
How to get nucleotide sequences for a given list of genomic positions.
ChIP-Seq sequence NGS
updated 9.4 years ago by ★ 4.7k • written 9.4 years ago by ▴ 110
0
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0
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5.2k
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Comment: C: How to get nucleotide sequences for a given list of genomic positions.
9.4 years ago by Naresh D J ▴ 110
0
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0
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2.7k
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Comment: C: Select random lines from the given bed files following the same distribution as
9.4 years ago by Naresh D J ▴ 110
1
vote
5
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3.0k
views
How to separate chip-seq peaks which are enriched for known TFs motifs from given list of peaks
ChIP-Seq HOMER NGS data analysis
updated 9.4 years ago by ★ 5.2k • written 9.5 years ago by ▴ 110
0
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1
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3.0k
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Answer: A: How to separate chip-seq peaks which are enriched for known TFs motifs from give
9.4 years ago by Naresh D J ▴ 110
0
votes
1
reply
2.7k
views
Comment: C: Select random lines from the given bed files following the same distribution as
9.4 years ago by Naresh D J ▴ 110
0
votes
1
reply
2.7k
views
Comment: C: Select random lines from the given bed files following the same distribution as
9.4 years ago by Naresh D J ▴ 110
0
votes
6
replies
2.7k
views
Select random lines from the given bed files following the same distribution as given input file
ChIP-Seq bedtools
9.4 years ago by Naresh D J ▴ 110
1
vote
1
reply
4.1k
views
Best way to present the single cell RNA-seq data and bulk RNA-seq expression data together
RNA-Seq scRNA-seq Heatmap
9.5 years ago by Naresh D J ▴ 110
0
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0
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2.8k
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Comment: C: Subgroup significance testing
9.8 years ago by Naresh D J ▴ 110
0
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0
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5.8k
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Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
10.1 years ago by Naresh D J ▴ 110
0
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0
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5.8k
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Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
10.1 years ago by Naresh D J ▴ 110
4
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10
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5.8k
views
How to separate htseq-count table to coding RNAs and non-coding RNAs
RNA-Seq htseq-count
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 110
0
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1
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5.8k
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Comment: Comment: How to separate htseq-count table to coding RNAs and non-coding RNAs
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 110
0
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2
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5.8k
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Comment: C: How to separate htseq-count table to coding RNAs and non-coding RNAs
10.1 years ago by Naresh D J ▴ 110
0
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0
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2.5k
views
Comment: C: Help with DEseq2 design matrix and DE expression analysis
10.1 years ago by Naresh D J ▴ 110
1
vote
2
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2.5k
views
Help with DEseq2 design matrix and DE expression analysis
RNA-Seq DEseq2
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 110
0
votes
1
reply
12k
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Comment: Comment: How to run the BLAST program with the un-mapped reads in bam format from tophat
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 110
0
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1
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12k
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Comment: C: How to run the BLAST program with the un-mapped reads in bam format from tophat
10.2 years ago by Naresh D J ▴ 110
15
votes
6
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12k
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How to run the BLAST program with the un-mapped reads in bam format from tophat
RNA-Seq blast reads
updated 3.1 years ago by 45k • written 10.2 years ago by ▴ 110
2
votes
12
replies
12k
views
Cutadapt installation issues
RNA-Seq
updated 6.0 years ago by 45k • written 10.2 years ago by ▴ 110
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