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questions
4
votes
7
replies
605
views
Can any JBrowse2 tracks show multiple colors for reads at different nucleotide positions?
JBrowse
JBrowse2
updated 4 weeks ago by
cmdcolin
★ 3.8k • written 5 weeks ago by
I0110
▴ 140
0
votes
3
replies
618
views
Identifying syntenic gene pairs
Synteny
updated 9 months ago by
dthorbur
★ 1.9k • written 9 months ago by
I0110
▴ 140
0
votes
1
reply
470
views
Pre-filtering of annotated isoforms based on splice junctions
RSEM
isoforms
splicing
RNA-seq
Kallisto
updated 10 months ago by
dthorbur
★ 1.9k • written 10 months ago by
I0110
▴ 140
3
votes
4
replies
873
views
JBrowse on GitHub (A question about file size)
JBrowse
GitHub
15 months ago by
I0110
▴ 140
3
votes
2
replies
640
views
A question about STAR and SLURM
SLURM
STAR
23 months ago by
I0110
▴ 140
12
votes
3
replies
772
views
A question about code sharing for publication
code
updated 16 months ago by
Ram
43k • written 23 months ago by
I0110
▴ 140
0
votes
0
replies
481
views
Understanding degradome-seq result
degradome
2.6 years ago by
I0110
▴ 140
2
votes
4
replies
1.5k
views
What is "Possible polymerase run-on fragment"?
transcriptome
updated 3.7 years ago by
Ram
43k • written 5.9 years ago by
I0110
▴ 140
2
votes
1
reply
3.6k
views
Thermo Xcalibur RAW data to MGF
mass spectrometry
massspectrometry
updated 4.2 years ago by
Biostar
20 • written 6.0 years ago by
I0110
▴ 140
6
votes
13
replies
5.1k
views
How to add the start and stop position information to a gff file?
genome
R
Assembly
Python
updated 4.7 years ago by
Juke34
8.6k • written 7.2 years ago by
I0110
▴ 140
1
vote
6
replies
2.5k
views
Nanopore data to gtf/gff file
sequencing
assembly
updated 3.0 years ago by
sonsunjirachote
• 0 • written 4.9 years ago by
I0110
▴ 140
7
votes
2
replies
1.4k
views
How to start a website with jbrowse to show sequencing data?
jbrowse
updated 5.6 years ago by
Biostar
20 • written 5.6 years ago by
I0110
▴ 140
0
votes
1
reply
2.3k
views
How to merge mgf files?
Proteomics
updated 5.7 years ago by
mobiusklein
▴ 180 • written 5.8 years ago by
I0110
▴ 140
2
votes
2
replies
2.1k
views
CDS prediction for newly assembled transcripts
RNA-Seq
transcriptome
Assembly
CDS
5.9 years ago by
I0110
▴ 140
1
vote
3
replies
2.2k
views
How to fix 5'UTR annotation with RNA-seq data?
RNA-Seq
updated 6.2 years ago by
rajeev.vikram
▴ 40 • written 6.2 years ago by
I0110
▴ 140
2
votes
1
reply
2.3k
views
Identify transcription start site using RNA-seq data
RNA-Seq
updated 6.3 years ago by
ababaian
▴ 50 • written 6.3 years ago by
I0110
▴ 140
1
vote
2
replies
1.1k
views
The use of "and" in bioinformatics literature
Microarray
updated 6.3 years ago by
Ahill
★ 1.9k • written 6.3 years ago by
I0110
▴ 140
7
votes
4
replies
2.4k
views
In the gff3 format, could one eukaryotic mRNA contain more than one protein coding sequences (i.e. polycistronic)?
gff3
annotation
6.3 years ago by
I0110
▴ 140
0
votes
0
replies
990
views
bed file to gtf/gff
genome
annotation
6.7 years ago by
I0110
▴ 140
1
vote
7
replies
1.8k
views
Host bam file on MongoDB?
MongoDB
R
6.7 years ago by
I0110
▴ 140
6
votes
5
replies
2.6k
views
Homologs between tomato and Arabidopsis
genome
homology
updated 6.8 years ago by
h.mon
35k • written 6.8 years ago by
I0110
▴ 140
11
votes
13
replies
4.2k
views
6 follow
Differential expression for two very different samples
RNA-Seq
Statistics
updated 6.8 years ago by
James Ashmore
★ 3.4k • written 6.8 years ago by
I0110
▴ 140
0
votes
1
reply
1.4k
views
1D NMR spectra to metabolites
metabolomics
NMR
updated 7.2 years ago by
Egon Willighagen
5.4k • written 7.2 years ago by
I0110
▴ 140
0
votes
0
replies
1.1k
views
Rate of evolutionary change in coding region and UTRs
R
8.0 years ago by
I0110
▴ 140
1
vote
0
replies
2.0k
views
r for RNA/RNA hybrid free energy
R
updated 23 months ago by
Ram
43k • written 8.5 years ago by
I0110
▴ 140
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