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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
2 days ago by User 7754 ▴ 270
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
2 days ago by User 7754 ▴ 270
0
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1
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
3 days ago by User 7754 ▴ 270
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
4 days ago by User 7754 ▴ 270
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
18 days ago by User 7754 ▴ 270
1
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0
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 days ago by User 7754 ▴ 270
0
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1
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
19 days ago by User 7754 ▴ 270
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2
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1.0k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
19 days ago by User 7754 ▴ 270
5
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17
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1.0k
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Current best practive to liftOver many SNVs from hg19 to GRCh38
liftOver
2 days ago by User 7754 ▴ 270
0
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0
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519
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software and publicly available datasets for eQTLs?
eqtls
17 months ago by User 7754 ▴ 270
5
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19
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11k
views
Plot Genes In R Under A Regional Manhattan Plot
r gene plot
updated 4.6 years ago by ★ 3.4k • written 12.2 years ago by ▴ 270
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4.1k
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Comment: C: P-value for enrichment of ChIP-Seq peaks within a genomic annotation
updated 4.8 years ago by 44k • written 8.9 years ago by ▴ 270
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1
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4.1k
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Comment: C: P-value for enrichment of ChIP-Seq peaks within a genomic annotation
updated 4.8 years ago by 44k • written 8.9 years ago by ▴ 270
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1
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2.6k
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Comment: C: Enrichment determination from random sampling
updated 4.8 years ago by 44k • written 8.9 years ago by ▴ 270
1
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1
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5.4k
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Answer: A: GenomicFeatures makeTxDbFromGFF: Select by columns in gtf file
updated 4.8 years ago by 44k • written 8.9 years ago by ▴ 270
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2.6k
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Comment: Comment: bedop: output overlap for each region in a file
updated 2.0 years ago by 44k • written 9.0 years ago by ▴ 270
2
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0
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2.9k
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Answer: A: Is it possible to specify a reference allele while computing LD in Plink?
updated 4.8 years ago by 44k • written 9.0 years ago by ▴ 270
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1
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1.1k
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Find region that full captures association signal
GWAS LD pvalue
updated 5.3 years ago by ▴ 460 • written 5.3 years ago by ▴ 270
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1
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3.0k
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Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.4 years ago by User 7754 ▴ 270
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1
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3.0k
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Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.4 years ago by User 7754 ▴ 270
1
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0
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3.0k
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Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.4 years ago by User 7754 ▴ 270
3
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7
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3.0k
views
How to compute enrichment of one feature in the other across the genome (log fold, and pvalue)
genome enrichment
5.4 years ago by User 7754 ▴ 270
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1
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1.3k
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Comment: C: Batch download of bed files for all transcription factors associated with a cell
5.4 years ago by User 7754 ▴ 270
2
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3
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1.3k
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Batch download of bed files for all transcription factors associated with a cell type
ChIP-Seq Transcription factors cell-type specific
updated 5.4 years ago by 84k • written 5.4 years ago by ▴ 270
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1
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6.3k
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Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
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1
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6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
17
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31
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6.3k
views
Finding the best model for expression data (RNA-Seq counts)
RNA-Seq glm model fit regression
updated 5.5 years ago by 20k • written 5.5 years ago by ▴ 270
1
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2
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6.3k
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Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
1
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0
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6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
1
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1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
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1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
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1
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6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
votes
1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
votes
1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
votes
1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
votes
1
reply
6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
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2
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6.3k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.5 years ago by User 7754 ▴ 270
0
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0
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1.2k
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Empirical p-value after sampling matching distribution in R
R empirical p-value sampling binning
5.6 years ago by User 7754 ▴ 270
0
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0
replies
7.6k
views
Comment: C: Bedtools Error: Type checker found wrong number of fields while tokenizing data
5.9 years ago by User 7754 ▴ 270
4
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5
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7.6k
views
Bedtools Error: Type checker found wrong number of fields while tokenizing data line.
bedtools
updated 5.9 years ago by 35k • written 5.9 years ago by ▴ 270
0
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1
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7.6k
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Comment: C: Bedtools Error: Type checker found wrong number of fields while tokenizing data
5.9 years ago by User 7754 ▴ 270
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0
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1.0k
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GenomicRanges based on indices or more conditions, and add column from match
genomicRanges overlaps R
5.9 years ago by User 7754 ▴ 270
3
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2
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2.7k
views
Get indices from GenomicRanges reduce function
GenomicRanges reduce R
updated 6.0 years ago by 11k • written 6.0 years ago by ▴ 270
1
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1
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2.4k
views
Comment: C: R reduce across multiple ranges by row
6.0 years ago by User 7754 ▴ 270
0
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1
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2.4k
views
Comment: C: R reduce across multiple ranges by row
6.0 years ago by User 7754 ▴ 270
4
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9
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2.4k
views
R reduce across multiple ranges by row
genomicranges R ranges reduce
updated 6.0 years ago by 44k • written 6.0 years ago by ▴ 270
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0
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2.4k
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Comment: C: R reduce across multiple ranges by row
updated 6.0 years ago by 44k • written 6.0 years ago by ▴ 270
3
votes
2
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1.1k
views
R package to annotate and explore effect of biases in RNA Seq
R RNA-Seq annotation
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 270
0
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1
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1.5k
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Comment: C: Understanding HiChIP data and interactions
6.1 years ago by User 7754 ▴ 270
2
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3
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1.5k
views
Understanding HiChIP data and interactions
HiChIP
updated 6.1 years ago by 104k • written 6.1 years ago by ▴ 270
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