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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
14 months ago by Assa Yeroslaviz ★ 1.8k
10
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17
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3.2k
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How do one analyze data from SMART-Seq stranded kit (v4)?
single-cell smart-seq
updated 14 months ago by ★ 6.0k • written 14 months ago by ★ 1.8k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
14 months ago by Assa Yeroslaviz ★ 1.8k
0
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2
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3.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
14 months ago by Assa Yeroslaviz ★ 1.8k
0
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0
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409
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bamComparing ChIp-Seq samples with strange coverage between chipped and Input
normalization bamCompare deepTools
updated 10 months ago by 43k • written 14 months ago by ★ 1.8k
3
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4
replies
2.6k
views
STAR aligner can't map too short reads
ribo-seq star
updated 15 months ago by 19k • written 15 months ago by ★ 1.8k
1
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1
reply
928
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Comment: Comment: How to calculate the offset for a riboseq experiment
17 months ago by Assa Yeroslaviz ★ 1.8k
4
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3
replies
928
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How to calculate the offset for a riboseq experiment
sequencing p-site riboseq offset
updated 17 months ago by ▴ 360 • written 17 months ago by ★ 1.8k
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0
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1.2k
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Comment: Comment: How to interpret the nine-square plot from mageckFlute
17 months ago by Assa Yeroslaviz ★ 1.8k
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0
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1.2k
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Comment: Comment: How to interpret the nine-square plot from mageckFlute
17 months ago by Assa Yeroslaviz ★ 1.8k
5
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4
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1.2k
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How to interpret the nine-square plot from mageckFlute
mageck mageckFlute squareView scatterplot
17 months ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
825
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Comment: Comment: Need help understanding GEO data structure
18 months ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
825
views
Comment: Comment: Need help understanding GEO data structure
18 months ago by Assa Yeroslaviz ★ 1.8k
1
vote
5
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825
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Need help understanding GEO data structure
Run-Selector GEO gene-expression-omnibus
updated 18 months ago by 142k • written 18 months ago by ★ 1.8k
4
votes
2
replies
586
views
How to extract min and max values of a gene from different columns
group_by tibble tidyverse
updated 18 months ago by 14k • written 18 months ago by ★ 1.8k
0
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0
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557
views
Comment: Comment: expanding a table by duplicating rows of a specific pattern
19 months ago by Assa Yeroslaviz ★ 1.8k
3
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2
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557
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expanding a table by duplicating rows of a specific pattern
tidyyverse dplyr R data.frame
19 months ago by Assa Yeroslaviz ★ 1.8k
0
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0
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4.0k
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Comment: Comment: Dealing with nanopore fast5 files compressed with vbz
20 months ago by Assa Yeroslaviz ★ 1.8k
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0
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617
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Comment: Comment: Identifying binding sequences of a specific protein to its target
20 months ago by Assa Yeroslaviz ★ 1.8k
2
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3
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617
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Identifying binding sequences of a specific protein to its target
transcription-factor-binding-site gene-regulation transcription-factor
20 months ago by Assa Yeroslaviz ★ 1.8k
0
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0
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700
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Comment: Comment: Ca you help me understand the Nanopore fastqc results?
24 months ago by Assa Yeroslaviz ★ 1.8k
0
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2
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700
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Ca you help me understand the Nanopore fastqc results?
pycoQC long-read-seq nanopore fastqc
24 months ago by Assa Yeroslaviz ★ 1.8k
8
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7
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2.7k
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Help me understand the Nanopore fastqc results
long-read-seq nanopore fastqc
updated 24 months ago by 100k • written 24 months ago by ★ 1.8k
0
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1
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2.7k
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Comment: Comment: Help me understand the Nanopore fastqc results
24 months ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
2.7k
views
Comment: Comment: Help me understand the Nanopore fastqc results
24 months ago by Assa Yeroslaviz ★ 1.8k
15
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11
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8.8k
views
6 follow
filter out fasta File by pattern
pattern fasta awk sed regexp
updated 24 months ago by 21k • written 9.2 years ago by ★ 1.8k
0
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0
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346
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pQTL analysis
plink GWAS pQTL linkage-disequilibrium
2.2 years ago by Assa Yeroslaviz ★ 1.8k
0
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0
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414
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Understanding DEXSeq results
dexseq normalization counts
2.2 years ago by Assa Yeroslaviz ★ 1.8k
3
votes
1
reply
501
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Basic understanding of Hi-C and interacion (contact-) maps
TADs interactions contact-maps AB-compartments HiC
updated 2.2 years ago by 82k • written 2.2 years ago by ★ 1.8k
1
vote
1
reply
774
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Hoe do you do differential Splicing using edgeR command diffSpliceDGE?
differential-splicing edger diffSpliceDGE
updated 2.3 years ago by ▴ 120 • written 2.3 years ago by ★ 1.8k
1
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1
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1.5k
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Comment: Comment: Online training - Snakemake: Reproducible and Scalable Bioinformatic Workflows
2.4 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
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5.1k
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Comment: Comment: How do I compare reads between two bam file?
2.6 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
5.1k
views
Comment: Comment: How do I compare reads between two bam file?
2.6 years ago by Assa Yeroslaviz ★ 1.8k
5
votes
5
replies
5.1k
views
How do I compare reads between two bam file?
samtools reads bam compare
updated 2.6 years ago by 161k • written 2.6 years ago by ★ 1.8k
0
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0
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11k
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Comment: Comment: How Find Genes On Specific Positions
2.6 years ago by Assa Yeroslaviz ★ 1.8k
0
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0
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2.3k
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Comment: Comment: DESeq2 model matrix not full rank
2.9 years ago by Assa Yeroslaviz ★ 1.8k
1
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0
replies
1.6k
views
Comment: Comment: DESeq2 comparison two cell types and two genotypes
3.0 years ago by Assa Yeroslaviz ★ 1.8k
2
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1
reply
1.7k
views
Comment: Comment: Failing to run tblastn
3.0 years ago by Assa Yeroslaviz ★ 1.8k
4
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4
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1.7k
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Answer: Answer: Failing to run tblastn
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
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1.7k
views
Comment: Comment: Failing to run tblastn
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
1.7k
views
Comment: Comment: Failing to run tblastn
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
1.7k
views
Comment: Comment: Failing to run tblastn
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
1.6k
views
Comment: Comment: DESeq2 comparison two cell types and two genotypes
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
46k
views
Comment: Comment: Bam File: Change Chromosome Notation
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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0
replies
475
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comparing distinct peaks from riboseq profiling results
ribosomal-profiling ribo-seq peaks
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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1
reply
46k
views
Comment: Comment: Bam File: Change Chromosome Notation
3.0 years ago by Assa Yeroslaviz ★ 1.8k
0
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0
replies
845
views
adjust size of png images in a rasterGrob object
rasterGrob PNG Rmarkdown layout
3.1 years ago by Assa Yeroslaviz ★ 1.8k
2
votes
1
reply
770
views
Mapping after WGS show a parabel form
WGS mapping SNP CNV
updated 3.1 years ago by ▴ 10 • written 3.1 years ago by ★ 1.8k
0
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0
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811
views
Comment: C: Modifying an annotation files after transgene insertion
3.2 years ago by Assa Yeroslaviz ★ 1.8k
0
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2
replies
811
views
Modifying an annotation files after transgene insertion
transgene insertion gtf annotation
3.2 years ago by Assa Yeroslaviz ★ 1.8k
561 results • Page 2 of 12
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