Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
4
replies
3.3k
views
How to make GFF file based on assembled transcriptome and genome sequence?
RNA-Seq Assembly ChIP-Seq sequencing
updated 4.1 years ago by 35k • written 4.1 years ago by ▴ 800
6
votes
7
replies
5.7k
views
6 follow
What are the best tools for visualizing DNA methylation result?
rrbs methylation RNA-Seq
updated 18 months ago by • 0 • written 5.9 years ago by ▴ 800
2
votes
2
replies
1.9k
views
What is the best pipeline for analyzing Non-invasive prenatal (NIPT) data?
genome next-gen alignment
updated 5.1 years ago by ▴ 10 • written 5.4 years ago by ▴ 800
8
votes
5
replies
4.0k
views
How to do DMR analysis with BiSeq (for RRBS methylation data)?
sequencing DMR methylation
updated 5.2 years ago by 8.2k • written 6.3 years ago by ▴ 800
1
vote
0
replies
3.3k
views
Comment: C: How to merge microarray and RNA-SEQ expression data for DEG analysis?
5.3 years ago by ahmad mousavi ▴ 800
5
votes
2
replies
3.3k
views
How to merge microarray and RNA-SEQ expression data for DEG analysis?
RNA-Seq microarray expression
updated 5.4 years ago by 87k • written 5.4 years ago by ▴ 800
0
votes
1
reply
3.0k
views
Answer: A: Differential expression analysis on miRNA count files
5.4 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
837
views
How much data and how many libraries do we need for de-novo assembly?
Assembly sequencing genome next-gen
updated 5.4 years ago by ★ 3.2k • written 5.4 years ago by ▴ 800
0
votes
1
reply
4.8k
views
Comment: C: Too many contig after genome assembly with Spades
5.5 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
4.8k
views
Comment: C: Too many contig after genome assembly with Spades
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
1.7k
views
Answer: A: heat map clustering
5.5 years ago by ahmad mousavi ▴ 800
3
votes
0
replies
6.2k
views
Answer: A: TOPGO- how to do GO enrichment using a custom go database?
5.5 years ago by ahmad mousavi ▴ 800
0
votes
2
replies
4.8k
views
Comment: C: Too many contig after genome assembly with Spades
5.5 years ago by ahmad mousavi ▴ 800
6
votes
14
replies
4.8k
views
Too many contig after genome assembly with Spades
assembly genome sequence
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
9.0k
views
Answer: A: How long is the waiting time for a job to run?
5.5 years ago by ahmad mousavi ▴ 800
0
votes
2
replies
6.4k
views
Comment: C: Showing up and down regulated GO and pathway using enrichR and ggplot2
5.5 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
4.5k
views
Comment: C: Converting Blast output to GFF
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
4.5k
views
Comment: C: Converting Blast output to GFF
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
1.2k
views
Answer: A: Using HTSeq-count on a SAM file?
5.5 years ago by ahmad mousavi ▴ 800
3
votes
5
replies
4.5k
views
Converting Blast output to GFF
Assembly genome blast
updated 3.1 years ago by • 0 • written 5.5 years ago by ▴ 800
0
votes
0
replies
1.3k
views
Comment: C: Remove lines from a toptable that have an empty ID (symbol)
5.5 years ago by ahmad mousavi ▴ 800
3
votes
2
replies
1.3k
views
Answer: A: removing lines from a toptable that have an empty ID (symbol)?
5.5 years ago by ahmad mousavi ▴ 800
1
vote
1
reply
2.0k
views
Answer: A: Extract a word from inside the text
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
1.9k
views
Comment: C: What would be the trend in next few years in NGS era?
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
1.9k
views
Comment: C: What would be the trend in next few years in NGS era?
5.5 years ago by ahmad mousavi ▴ 800
17
votes
14
replies
1.9k
views
10 follow
Forum: What would be the trend in next few years in NGS era?
NGS sequencing
updated 11 months ago by 43k • written 5.5 years ago by ▴ 800
0
votes
0
replies
3.0k
views
Comment: C: Finding gene expression from TCGA pan cancer
5.5 years ago by ahmad mousavi ▴ 800
1
vote
1
reply
3.0k
views
Answer: A: Finding gene expression from TCGA pan cancer
5.5 years ago by ahmad mousavi ▴ 800
0
votes
2
replies
4.3k
views
Comment: A: Making a counts
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
4.2k
views
Comment: C: How to do feature selection using PCA?
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
4.2k
views
Comment: C: How to do feature selection using PCA?
5.5 years ago by ahmad mousavi ▴ 800
3
votes
0
replies
3.5k
views
Answer: A: miRNA/smallRNA adapter triming: Any recommendations for adaptor error rate and s
5.5 years ago by ahmad mousavi ▴ 800
1
vote
5
replies
4.2k
views
How to do feature selection using PCA?
RNA-Seq R pca
5.5 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
3.5k
views
Answer: A: Best tool for Motif enrichment of TFs
5.5 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
8.5k
views
Comment: A: How to perform PCA on gene expression?
5.5 years ago by ahmad mousavi ▴ 800
1
vote
4
replies
2.3k
views
How to make cluster from gene read count?
RNA-Seq clustering R deseq2 edgeR
updated 5.5 years ago by ★ 2.0k • written 5.6 years ago by ▴ 800
25
votes
19
replies
12k
views
8 follow
How to make k-means clustering plot for relative expression?
RNA-Seq R deseq2
updated 5.5 years ago by ★ 2.0k • written 5.6 years ago by ▴ 800
0
votes
0
replies
2.8k
views
Answer: A: Should I specialise in bioinformatics?
5.6 years ago by ahmad mousavi ▴ 800
8
votes
3
replies
12k
views
Answer: A: How to make k-means clustering plot for relative expression?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
12k
views
Comment: C: How to make k-means clustering plot for relative expression?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
12k
views
Comment: C: How to make k-means clustering plot for relative expression?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
12k
views
Comment: C: How to make k-means clustering plot for relative expression?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
2.3k
views
Comment: C: How to make cluster from gene read count?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
6.3k
views
Comment: C: How to add stats. to volcano plot?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
6.3k
views
Comment: C: How to add stats. to volcano plot?
5.6 years ago by ahmad mousavi ▴ 800
7
votes
5
replies
6.3k
views
How to add stats. to volcano plot?
RNA-Seq R ggplot2 plot
5.6 years ago by ahmad mousavi ▴ 800
0
votes
0
replies
5.7k
views
Comment: C: What are the best tools for visualizing DNA methylation result?
5.6 years ago by ahmad mousavi ▴ 800
0
votes
2
replies
5.7k
views
Comment: C: What are the best tools for visualizing DNA methylation result?
5.8 years ago by ahmad mousavi ▴ 800
0
votes
1
reply
2.5k
views
Comment: C: How to interepret DNA methylation by DSS package?
5.9 years ago by ahmad mousavi ▴ 800
3
votes
4
replies
2.5k
views
How to interepret DNA methylation by DSS package?
RRBS wgbs
updated 5.9 years ago by 104k • written 5.9 years ago by ▴ 800
113 results • Page 2 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6