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Covarites in GWAS via GCTA
covariate GCTA fastGWA
updated 8 months ago by 154k • written 12 months ago by ▴ 50
0
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1
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925
views
Comment: Comment: Assistance with Identifying Human Orthologs of Catle SNPs
13 months ago by Star:) ▴ 50
5
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3
replies
925
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Assistance with Identifying Human Orthologs of Catle SNPs
Orthologs SNPs Catle Human
updated 13 months ago by 154k • written 13 months ago by ▴ 50
1
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1
reply
589
views
centromere of cattle
centromere cattle
15 months ago by Star:) ▴ 50
0
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1
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1.6k
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Comment: Comment: ROH and Manhattan plot
15 months ago by Star:) ▴ 50
3
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5
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1.6k
views
ROH and Manhattan plot
ROH Manhattan plink
updated 15 months ago by ★ 3.1k • written 16 months ago by ▴ 50
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1
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1.6k
views
Comment: Comment: ROH and Manhattan plot
15 months ago by Star:) ▴ 50
0
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0
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2.2k
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Comment: Comment: SNeP - Historical Ne Trends
2.6 years ago by Star:) ▴ 50
0
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0
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689
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Calculating Ne (effective population size) for big data
data Ne big
2.6 years ago by Star:) ▴ 50
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0
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2.2k
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Comment: Comment: SNeP - Historical Ne Trends
2.6 years ago by Star:) ▴ 50
0
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1
reply
865
views
FST and HWE
hwe fst
updated 2.8 years ago by ★ 2.4k • written 2.8 years ago by ▴ 50
5
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3
replies
1.7k
views
what is the difference between QTL heritability and heritability?
heritability QTL
updated 3.1 years ago by 10k • written 3.1 years ago by ▴ 50
0
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1
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1.7k
views
Comment: Comment: what is the difference between QTL heritability and heritability?
3.1 years ago by Star:) ▴ 50
0
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1
reply
739
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why assortative mating can cause bias in GWAS results?
assortative SNPchip GWAS mating
updated 3.5 years ago by ▴ 350 • written 3.5 years ago by ▴ 50
1
vote
2
replies
569
views
What factors affect p value in GWAS ?
SNPchip GWAS p-value
written 3.6 years ago by ▴ 50
1
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0
replies
674
views
How can I draw manhattan plot by ROH value?
roh plink
3.6 years ago by Star:) ▴ 50
0
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0
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540
views
How to calculate recombination frequency from genotype file?
recombination
3.6 years ago by Star:) ▴ 50
0
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0
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2.7k
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Comment: Comment: what is log –log10 in GWAS ?
3.6 years ago by Star:) ▴ 50
0
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0
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602
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Plink and criteria
plink
3.6 years ago by Star:) ▴ 50
6
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2
replies
2.7k
views
what is log –log10 in GWAS ?
GWAS
3.6 years ago by Star:) ▴ 50
0
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0
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1.6k
views
Comment: Comment: GWAS and Hetrozigosity
3.7 years ago by Star:) ▴ 50
0
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1
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1.6k
views
Comment: Comment: GWAS and Hetrozigosity
3.7 years ago by Star:) ▴ 50
0
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4
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1.6k
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GWAS and Hetrozygosity
SNPchip GWAS Heterozygosity
updated 3.7 years ago by 11k • written 3.7 years ago by ▴ 50
0
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1
reply
1.2k
views
How to describe bi-plot PCA figure?
PCA
updated 3.8 years ago by ★ 30k • written 3.8 years ago by ▴ 50
2
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2
replies
2.6k
views
How to convert genotypes "1, 2" to "0,1, 2"?
snp plink
updated 2.1 years ago by ▴ 10 • written 4.3 years ago by ▴ 50
3
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1
reply
8.0k
views
What is the difference between covariate with fixed effect and random effect?
covariate mlm componentsvariance gwas
updated 4.3 years ago by ▴ 130 • written 4.3 years ago by ▴ 50
3
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3
replies
4.1k
views
GCTA make GRM error contains illegal chr number
plink GCTA
4.3 years ago by Star:) ▴ 50
0
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0
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4.1k
views
Answer: Answer: GCTA make GRM error contains illegal chr number
4.3 years ago by Star:) ▴ 50
0
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0
replies
1.0k
views
Error: Merging ped and map files by PLINK
SNP plink merge
4.7 years ago by Star:) ▴ 50
0
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3
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1.3k
views
Can we draw PCA with genotyping data align with geographic data for two different populations in different locations?
SNP ChIP-Seq genome
5.4 years ago by Star:) ▴ 50
0
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1
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1.3k
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Comment: A: Can we draw PCA with genotyping data align with geographic data for two differen
5.4 years ago by Star:) ▴ 50
0
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2
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3.0k
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How can I get the sheep chromosomes centromere position and chromosomes length???
genome
updated 5.4 years ago by 36k • written 9.3 years ago by ▴ 50
0
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0
replies
18k
views
Answer: Answer: Watterson's estimator "theta"
updated 2.8 years ago by 45k • written 9.1 years ago by ▴ 50
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