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distinguish between alleles and isoforms in a de novo assembly
assembly
4.1 years ago by utsafar ▴ 80
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3.0k
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Comment: C: Why are some mapped reads not mapped completely?
4.9 years ago by utsafar ▴ 80
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3.0k
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Comment: C: Why are some mapped reads not mapped completely?
4.9 years ago by utsafar ▴ 80
14
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16
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3.0k
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Why are some mapped reads not mapped completely?
RNA-Seq mapping
updated 4.9 years ago by 15k • written 4.9 years ago by ▴ 80
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3
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3.0k
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Comment: C: Why some mapped reads are are not mapped completely?
4.9 years ago by utsafar ▴ 80
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3.0k
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Comment: C: Why some mapped reads are are not mapped completely?
4.9 years ago by utsafar ▴ 80
0
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1
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3.0k
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Comment: C: Why some mapped reads are are not mapped completely?
4.9 years ago by utsafar ▴ 80
0
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0
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960
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How to include depth of coverage of k prior and posterior neighbours of a position in vcf file?
RNA-Seq sequence Depth of Coverage VCF
4.9 years ago by utsafar ▴ 80
3
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1
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1.6k
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Answer: C: transfer data from cluster to cluster
4.9 years ago by utsafar ▴ 80
4
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5
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3.2k
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RNA-Seq differential gene expression without biological and technical replicates.
RNA-Seq
updated 5.1 years ago by • 0 • written 5.2 years ago by ▴ 80
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4
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2.2k
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Is it possible to run an Allele Specific Expression (ASE) experiment with just RNA-Seq data?
RNA-Seq ASE
updated 5.9 years ago by ▴ 50 • written 9.3 years ago by ▴ 80
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3
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1.6k
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How to better find and select the appropriate data set for my research?
RNA-Seq sequencing
updated 6.4 years ago by 20 • written 7.6 years ago by ▴ 80
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3.9k
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Comment: C: How can I download data from plants.ensembl.org using wget in biomart?
6.6 years ago by utsafar ▴ 80
6
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3
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3.9k
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How can I download data from plants.ensembl.org using wget in biomart?
ensembl wget biomart
updated 6.6 years ago by ▴ 330 • written 6.6 years ago by ▴ 80
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5.7k
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Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
10
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23
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5.7k
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8 follow
Are these two proteins homolog?
homology
updated 7.1 years ago by ▴ 330 • written 7.1 years ago by ▴ 80
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1
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5.7k
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Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
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2
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5.7k
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Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
0
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0
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5.7k
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Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
0
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0
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5.7k
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Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
0
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1
reply
5.7k
views
Comment: C: Are these two proteins homolog?
7.1 years ago by utsafar ▴ 80
2
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0
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69k
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Answer: A: Idenity, e value or bitscore ?
7.1 years ago by utsafar ▴ 80
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1
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5.7k
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Comment: C: identity, positivity and similarity in blastp results
7.2 years ago by utsafar ▴ 80
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4
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5.7k
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identity, positivity and similarity in blastp results
blastp blast similarity
7.2 years ago by utsafar ▴ 80
1
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1
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1.7k
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Why these blast bitscores are low?
blast
7.5 years ago by utsafar ▴ 80
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1
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1.6k
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Comment: C: How to better find and select the appropriate data set for my research?
7.6 years ago by utsafar ▴ 80
0
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1
reply
1.5k
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Where can I find Human (and other species) Single Copy Genes dataset?
sequence gene blast
7.8 years ago by utsafar ▴ 80
10
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7
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2.7k
views
Are transcription factors some kind of eQTLs?
eQTL Transcription_Factors
updated 8.2 years ago by 27k • written 8.2 years ago by ▴ 80
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1
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2.7k
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Comment: C: Are transcription factors some kind of eQTLs?
8.2 years ago by utsafar ▴ 80
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3.0k
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Answer: A: getorf: Remove Overlapping Open Reading Frames
8.2 years ago by utsafar ▴ 80
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1
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1.5k
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Comment: C: When to decide that two similar sequences are different genes or not?
8.4 years ago by utsafar ▴ 80
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4
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1.5k
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When to decide that two similar sequences are different genes or not?
Assembly sequence RNA-Seq
8.4 years ago by utsafar ▴ 80
5
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2
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3.6k
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plant housekeeping genes without paralogs
gene genome polyploidy
updated 2.3 years ago by 45k • written 8.4 years ago by ▴ 80
2
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1
reply
2.2k
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Three questions about an RNA-seq and protein domains data analysis.
RNA-Seq protein-domains Plant-Resistance-Genes
updated 8.9 years ago by ★ 2.8k • written 8.9 years ago by ▴ 80
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0
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2.6k
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Comment: C: Can I assemble a Eukaryote RNA-Seq using my laptop?
8.9 years ago by utsafar ▴ 80
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0
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3.1k
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Comment: C: Format convert error while using Trinity Galaxy
9.3 years ago by utsafar ▴ 80
0
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2
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3.1k
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Format convert error while using Trinity Galaxy
Trinity galaxy Format_convert
9.3 years ago by utsafar ▴ 80
9
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4
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2.6k
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Can I assemble a Eukaryote RNA-Seq using my laptop?
RNA-Seq Assembly saffron
updated 9.3 years ago by ▴ 20 • written 9.3 years ago by ▴ 80
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