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Comment: C: Finding ORF from a genome with a partial nucleotide sequence
7.0 years ago by reza ▴ 300
1
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1
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3.2k
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Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.0 years ago by reza ▴ 300
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1
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3.2k
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Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.0 years ago by reza ▴ 300
5
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5
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3.2k
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how to estimate mean and standard deviation read depth for all the variants?
SNP next-gen depth of coverage
7.0 years ago by reza ▴ 300
5
votes
2
replies
7.0k
views
how to select longest isoform per gene in gtf
gene GTF annotation
updated 7.0 years ago by ★ 2.7k • written 7.0 years ago by ▴ 300
5
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6
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2.0k
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ftp downloding error
ftp next-gen
updated 7.0 years ago by 20 • written 7.2 years ago by ▴ 300
0
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1
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3.8k
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Comment: C: number of functions is more than namber of variants in snpEff's output
7.1 years ago by reza ▴ 300
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1
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3.8k
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Comment: C: number of functions is more than namber of variants in snpEff's output
7.1 years ago by reza ▴ 300
0
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1
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3.8k
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Comment: C: number of functions is more than namber of variants in snpEff's output
7.1 years ago by reza ▴ 300
0
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4
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6.5k
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building database in snpEff
software error snpEff snp
updated 7.1 years ago by 20 • written 7.2 years ago by ▴ 300
0
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0
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2.0k
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Comment: C: ftp downloding error
7.2 years ago by reza ▴ 300
0
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1
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2.0k
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Comment: C: ftp downloding error
7.2 years ago by reza ▴ 300
6
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6
replies
3.2k
views
variant calling after mapping via bwa mem
next-gen snp alignment
updated 7.3 years ago by ★ 1.6k • written 7.4 years ago by ▴ 300
2
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0
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2.6k
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Comment: C: finding repeats in de-novo assembled contig from PacBio reads
7.3 years ago by reza ▴ 300
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0
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4.5k
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Comment: C: SNP annotation using gff3
7.3 years ago by reza ▴ 300
0
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8
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4.5k
views
SNP annotation using gff3
SNP sequencing next-gen
updated 7.3 years ago by ★ 4.9k • written 7.3 years ago by ▴ 300
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0
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4.5k
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Comment: C: SNP annotation using gff3
7.3 years ago by reza ▴ 300
0
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1
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4.5k
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Answer: A: SNP annotation using gff3
7.3 years ago by reza ▴ 300
4
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1
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5.6k
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Comment: C: Problems with Trimmomatic PE output files
7.3 years ago by reza ▴ 300
0
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1
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3.7k
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Comment: C: workflow for variant calling using GATK in multiple paired end reads
7.3 years ago by reza ▴ 300
0
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1
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3.2k
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Comment: C: variant calling after mapping via bwa mem
7.4 years ago by reza ▴ 300
2
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5
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3.7k
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beginner question BWA program
genome alignment
7.4 years ago by reza ▴ 300
0
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0
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3.7k
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Answer: A: beginner question BWA program
7.4 years ago by reza ▴ 300
2
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3
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2.5k
views
Trimmomatic for RNA-seq or Whole genome seuencing or for both?
next-gen sequencing
updated 7.4 years ago by ★ 4.9k • written 7.4 years ago by ▴ 300
0
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1
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3.7k
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Comment: C: beginner question BWA program
7.4 years ago by reza ▴ 300
1
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3
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1.9k
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SNP annotation in non model animals
SNP next-gen
updated 7.4 years ago by 20 • written 7.5 years ago by ▴ 300
0
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1
reply
2.8k
views
Augustus running error
software error next-gen
7.4 years ago by reza ▴ 300
1
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0
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2.6k
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Answer: A: quality read software
7.4 years ago by reza ▴ 300
0
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0
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1.9k
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Comment: C: SNP annotation in non model animals
7.4 years ago by reza ▴ 300
0
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2
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1.2k
views
publication of trial software
next-gen Assembly
updated 7.5 years ago by 20 • written 7.7 years ago by ▴ 300
0
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1
reply
2.4k
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Comment: C: CLC worcbench assembly
7.6 years ago by reza ▴ 300
2
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5
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2.4k
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CLC worcbench assembly
Assembly next-gen
updated 7.6 years ago by 5.8k • written 7.6 years ago by ▴ 300
1
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4
replies
2.1k
views
installing ABYSS using cygwin
abyss assembly
updated 7.6 years ago by 8.2k • written 7.6 years ago by ▴ 300
0
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1
reply
2.1k
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Comment: C: installing ABYSS using cygwin
7.6 years ago by reza ▴ 300
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1
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1.7k
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Comment: C: running SOAP using 32G RAM
7.7 years ago by reza ▴ 300
0
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6
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1.7k
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running SOAP using 32G RAM
Assembly next-gen
updated 7.7 years ago by ★ 1.5k • written 7.7 years ago by ▴ 300
0
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0
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1.2k
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Comment: C: publication of trial software
7.7 years ago by reza ▴ 300
2
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2
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2.2k
views
samtools/bcftools gave me no variant, why!?
software error snp
updated 7.7 years ago by ★ 3.8k • written 7.7 years ago by ▴ 300
1
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3
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3.2k
views
Tutorial: resolving error of sspace_standard
software-error Assembly
updated 13 months ago by 43k • written 7.7 years ago by ▴ 300
2
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1
reply
4.6k
views
Answer: A: Unequal paired-end fastq size after quality control
7.7 years ago by reza ▴ 300
3
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4
replies
1.6k
views
scoffold level assembly
Assembly next-gen
updated 7.7 years ago by ▴ 80 • written 7.7 years ago by ▴ 300
0
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1
reply
2.0k
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help request for running SOAPdenovo
Assembly
updated 7.7 years ago by 5.3k • written 7.7 years ago by ▴ 300
0
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0
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2.5k
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Comment: C: cygwin error when i try to install platypus (variant caller)
7.7 years ago by reza ▴ 300
0
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3
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2.5k
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cygwin error when i try to install platypus (variant caller)
software error SNP
7.7 years ago by reza ▴ 300
0
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2
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1.3k
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Comment: C: assemble in chromosome level for first time
7.7 years ago by reza ▴ 300
3
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5
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1.3k
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assemble in chromosome level for first time
Assembly next-gen
updated 7.7 years ago by 13k • written 7.7 years ago by ▴ 300
0
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0
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1.6k
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Comment: C: scoffold level assembly
7.7 years ago by reza ▴ 300
0
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0
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2.2k
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Comment: C: cnv-seq running error
7.8 years ago by reza ▴ 300
0
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1
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2.2k
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Comment: C: cnv-seq running error
7.8 years ago by reza ▴ 300
0
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4
replies
2.2k
views
cnv-seq running error
software error R genome
updated 7.8 years ago by 141k • written 7.8 years ago by ▴ 300
153 results • Page 3 of 4
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