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19
votes
8
replies
25k
views
7 follow
Merging/Concatenating Vcf Files
vcftools snp indel
written 10.6 years ago by ▴ 830
1
vote
4
replies
2.8k
views
Mapping shorts reads using Bowtie
index bowtie mapping samtools
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
0
replies
973
views
Comment: C: Comparing v3 and v4 datasets with v3-v4 amplicon datasets
2.7 years ago by bioinfo ▴ 830
1
vote
3
replies
973
views
Comparing v3 and v4 datasets with v3-v4 amplicon datasets
metabarcoding amplicon sequencing 16s rRNA
updated 2.7 years ago by 9.5k • written 2.7 years ago by ▴ 830
3
votes
4
replies
6.3k
views
How to align DNA reads against a database of protein references
alignment bowtie BWA
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
0
replies
6.0k
views
Answer: A: Blastdbcmd Cant Find Protein Database
updated 3.3 years ago by 38k • written 9.9 years ago by ▴ 830
2
votes
14
replies
7.2k
views
7 follow
Insert Size For Illumina Gaiix Paired-End Library From Sam/Bam File
illumina next-gen sam bam
updated 14 months ago by • 0 • written 10.6 years ago by ▴ 830
0
votes
1
reply
3.0k
views
Comment: C: Downloading protein sequences for a set of chromosomes from NCBI
updated 3.4 years ago by 38k • written 7.6 years ago by ▴ 830
0
votes
0
replies
2.2k
views
Comment: C: Designing primers by mapping short NGS reads to reference genes
updated 3.4 years ago by 38k • written 7.7 years ago by ▴ 830
1
vote
5
replies
6.0k
views
Blastdbcmd Cant Find Protein Database
blast
updated 3.4 years ago by 20 • written 9.9 years ago by ▴ 830
0
votes
1
reply
1.2k
views
Metagenomics vs metatranscriptomics
metagenomics metatranscriptomics assembly RNA-Seq
updated 3.5 years ago by ★ 23k • written 3.5 years ago by ▴ 830
0
votes
3
replies
763
views
Assembling multipartite (e.g. tripartite - 3 segments) viruses
virus Assembly
3.6 years ago by bioinfo ▴ 830
0
votes
0
replies
763
views
Comment: C: Assembling multipartite (e.g. tripartite) viruses
3.6 years ago by bioinfo ▴ 830
2
votes
3
replies
1.2k
views
Job: Senior bioinformatician, Auckland, New Zealand (3 yrs fixed-term)
sequencing virus database software Job
3.6 years ago by bioinfo ▴ 830
0
votes
1
reply
3.1k
views
Comment: C: Downloading all COI sequences from BOLD database
3.6 years ago by bioinfo ▴ 830
0
votes
2
replies
3.1k
views
Comment: C: Downloading all COI sequences from BOLD database
3.6 years ago by bioinfo ▴ 830
0
votes
5
replies
3.1k
views
Downloading all COI sequences from BOLD database
bold coi barcoding
3.6 years ago by bioinfo ▴ 830
0
votes
1
reply
1.2k
views
Comment: C: Senior bioinformatician, Auckland, New Zealand (3 yrs fixed-term)
3.7 years ago by bioinfo ▴ 830
5
votes
8
replies
4.0k
views
How To Extract Gene Names From An Unstructured Text File?
awk
updated 3.7 years ago by ▴ 60 • written 9.9 years ago by ▴ 830
5
votes
3
replies
1.9k
views
Required packages during Cygwin installation for bioinformatics work
cygwin tools wget
updated 3.8 years ago by 4.5k • written 3.9 years ago by ▴ 830
11
votes
13
replies
3.2k
views
6 follow
Forum: NGS Data storage solutions for small organisations or big labs
storage NGS bigdata HTS metagenomics Forum
updated 3.8 years ago by 16k • written 3.8 years ago by ▴ 830
0
votes
1
reply
108k
views
Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
4.6 years ago by bioinfo ▴ 830
1
vote
2
replies
1.2k
views
GC content in metagenomic data
metagenomics Assembly
4.6 years ago by bioinfo ▴ 830
7
votes
12
replies
15k
views
6 follow
Downloading Data From Mg-Rast
parsing
updated 9 months ago by 38k • written 9.0 years ago by ▴ 830
21
votes
8
replies
20k
views
8 follow
Building Snpeff Database
vcftools gatk snp
updated 16 months ago by ★ 2.0k • written 10.6 years ago by ▴ 830
0
votes
0
replies
2.0k
views
Comment: C: Rainbow assembly- segmentation fault?
5.3 years ago by bioinfo ▴ 830
57
votes
15
replies
46k
views
11 follow
Filtering Vcf File
vcftools vcf snp indel
updated 13 months ago by 38k • written 10.6 years ago by ▴ 830
0
votes
0
replies
17k
views
Comment: C: Counting mapped reads from a SAM file
5.6 years ago by bioinfo ▴ 830
0
votes
0
replies
4.7k
views
Answer: A: Extracting Specific Reads From Vcf File
5.7 years ago by bioinfo ▴ 830
0
votes
2
replies
6.2k
views
Rarefaction curve at different sequencing depths
rarefaction qiime metagenomics 16S
updated 5.7 years ago by 96k • written 5.7 years ago by ▴ 830
13
votes
11
replies
13k
views
8 follow
Retrieving Fasta Sequence Using Uniprot Id
fasta
updated 14 months ago by 38k • written 9.8 years ago by ▴ 830
0
votes
0
replies
1.4k
views
Subsampling a taxa abundance matrix
subsampling taxa
updated 8 months ago by 38k • written 7.1 years ago by ▴ 830
0
votes
1
reply
2.9k
views
Handling high duplication levels in fastqc report of raw illumina data from metagenomics
fastqc metageomics illumina
updated 8 months ago by 38k • written 7.3 years ago by ▴ 830
4
votes
5
replies
9.1k
views
Why Vcftools Commands Not Working?
vcftools snp perl
updated 7.4 years ago by ▴ 10 • written 10.6 years ago by ▴ 830
0
votes
0
replies
2.3k
views
Is there any toxin-antitoxin system (gene/protein) database?
ncbi toxin database
updated 8 months ago by 38k • written 7.5 years ago by ▴ 830
0
votes
6
replies
3.0k
views
Downloading protein sequences for a set of chromosomes from NCBI
ncbi genbank efetch
updated 5 months ago by 38k • written 7.6 years ago by ▴ 830
0
votes
6
replies
3.8k
views
Getting nucleotide sequences using protein accession
gene ncbi uniprot sequence
updated 6 months ago by 38k • written 7.5 years ago by ▴ 830
0
votes
0
replies
3.8k
views
Comment: C: Getting nucleotide sequences using protein accession
7.5 years ago by bioinfo ▴ 830
0
votes
1
reply
3.8k
views
Comment: Comment: Getting nucleotide sequences using protein accession
updated 6 months ago by 38k • written 7.5 years ago by ▴ 830
0
votes
3
replies
2.1k
views
Fastest and memory efficient tool for 16S RNA counts
16s-rRNA metagenome
updated 5 months ago by 38k • written 7.6 years ago by ▴ 830
0
votes
0
replies
2.1k
views
Comment: Comment: Fastest and memory efficient tool for 16S RNA counts
updated 5 months ago by 38k • written 7.6 years ago by ▴ 830
0
votes
0
replies
1.8k
views
USEARCH and Vmatch producing different number of hits
vmatch usearch blast NGS
updated 5 months ago by 38k • written 7.6 years ago by ▴ 830
0
votes
0
replies
2.8k
views
Comment: Comment: Mapping shorts reads using Bowtie
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
1
reply
2.8k
views
Comment: Comment: Mapping shorts reads using Bowtie
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
1
reply
2.2k
views
Comment: Comment: Designing primers by mapping short NGS reads to reference genes
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
4
replies
2.2k
views
Designing primers by mapping short NGS reads to reference genes
blast sam samtools gff alignment
updated 3 months ago by 38k • written 7.7 years ago by ▴ 830
0
votes
0
replies
1.4k
views
Assembling integron gene-cassettes from metagenomes
metagenomics Assembly integrons targeted-assembly
updated 7.7 years ago by 20 • written 7.8 years ago by ▴ 830
0
votes
0
replies
14k
views
Comment: Comment: Convert Illumina Reads To Sanger Score
updated 9 months ago by 38k • written 8.0 years ago by ▴ 830
1
vote
0
replies
5.1k
views
Comment: C: Filtering sanger_fastq, illumina_fastq files using Fastx-Toolkit
8.0 years ago by bioinfo ▴ 830
0
votes
2
replies
5.1k
views
Answer: Answer: Filtering sanger_fastq, illumina_fastq files using Fastx-Toolkit
updated 9 months ago by 38k • written 8.0 years ago by ▴ 830
153 results • Page 1 of 4
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