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9
votes
7
replies
2.8k
views
Stable Ensembl Ids
gene ensembl
updated 3.1 years ago by ▴ 450 • written 8.0 years ago by ▴ 190
2
votes
4
replies
4.7k
views
Updating rsids from one version of dbSNP to another
dbsnp rsids
updated 3.4 years ago by • 0 • written 7.3 years ago by ▴ 190
1
vote
3
replies
3.4k
views
GATK SplitNCigarReads Error
gatk RNA-Seq variant
updated 4.8 years ago by ▴ 20 • written 6.3 years ago by ▴ 190
0
votes
0
replies
2.0k
views
Answer: A: Bcftools filter error
5.1 years ago by BAGeno ▴ 190
1
vote
5
replies
2.0k
views
Bcftools filter error
bcftools filter
5.1 years ago by BAGeno ▴ 190
0
votes
1
reply
2.0k
views
Comment: C: Bcftools filter error
5.1 years ago by BAGeno ▴ 190
0
votes
1
reply
1.8k
views
Plot-vcfstats not installed
bcftools Plot-vcfstats
5.1 years ago by BAGeno ▴ 190
0
votes
1
reply
3.7k
views
Failed to liftover from hg38 to hg19
crossmap picard
updated 5.6 years ago by 20 • written 6.9 years ago by ▴ 190
1
vote
1
reply
1.3k
views
Problem with allele frequency calculation in vcf
vcf allele frequency
6.0 years ago by BAGeno ▴ 190
1
vote
3
replies
1.5k
views
Contra control file
contra cnv
updated 6.0 years ago by • 0 • written 6.1 years ago by ▴ 190
4
votes
6
replies
6.5k
views
Temporary Directory Problem in GATK4
gatk4 java temporary directory
updated 6.2 years ago by • 0 • written 7.2 years ago by ▴ 190
0
votes
0
replies
3.9k
views
Comment: C: Tranche Plot after VSQR
6.2 years ago by BAGeno ▴ 190
0
votes
1
reply
3.9k
views
Comment: C: Tranche Plot after VSQR
6.2 years ago by BAGeno ▴ 190
0
votes
1
reply
3.9k
views
Comment: C: Tranche Plot after VSQR
6.2 years ago by BAGeno ▴ 190
5
votes
8
replies
3.9k
views
Tranche Plot after VSQR
gatk4 VariantReclibration
updated 6.2 years ago by 11k • written 6.2 years ago by ▴ 190
0
votes
0
replies
3.9k
views
Comment: C: Tranche Plot after VSQR
6.2 years ago by BAGeno ▴ 190
0
votes
1
reply
4.2k
views
Comment: C: Vcf produced after ApplyVSQR step
6.2 years ago by BAGeno ▴ 190
0
votes
0
replies
4.2k
views
Comment: C: Vcf produced after ApplyVSQR step
6.2 years ago by BAGeno ▴ 190
0
votes
1
reply
4.2k
views
Comment: C: Vcf produced after ApplyVSQR step
6.3 years ago by BAGeno ▴ 190
1
vote
0
replies
4.2k
views
Comment: C: Vcf produced after ApplyVSQR step
6.3 years ago by BAGeno ▴ 190
0
votes
1
reply
4.2k
views
Comment: C: Vcf produced after ApplyVSQR step
6.3 years ago by BAGeno ▴ 190
2
votes
10
replies
4.2k
views
Vcf produced after ApplyVSQR step
gatk ApplyVSQR
updated 6.3 years ago by 6.7k • written 6.3 years ago by ▴ 190
0
votes
0
replies
3.4k
views
Comment: C: GATK SplitNCigarReads Error
6.3 years ago by BAGeno ▴ 190
0
votes
1
reply
1.3k
views
Control Samples for Excavator
excavator CNV
6.6 years ago by BAGeno ▴ 190
0
votes
2
replies
1.9k
views
GATK PrintRead Producing Empty File
gatk PrintRead
updated 6.6 years ago by 166k • written 6.6 years ago by ▴ 190
0
votes
0
replies
1.9k
views
Comment: C: Need sample vcf file containing Complete Exome sequences
6.7 years ago by BAGeno ▴ 190
0
votes
1
reply
3.6k
views
Comment: C: SNps and calculation of sample size
6.7 years ago by BAGeno ▴ 190
0
votes
0
replies
6.8k
views
Comment: C: Whole Exome CNV tools
6.7 years ago by BAGeno ▴ 190
6
votes
5
replies
6.8k
views
Whole Exome CNV tools
sequencing cnv next-gen exome
updated 6.7 years ago by ▴ 120 • written 6.7 years ago by ▴ 190
4
votes
1
reply
2.0k
views
Annovar and VEP overlapp
annovar vep
updated 6.9 years ago by 89k • written 6.9 years ago by ▴ 190
0
votes
1
reply
4.0k
views
Comment: C: Vep loftool threshold
6.9 years ago by BAGeno ▴ 190
0
votes
3
replies
4.0k
views
Vep loftool threshold
vep LoFtool
updated 6.9 years ago by 24k • written 6.9 years ago by ▴ 190
0
votes
1
reply
2.3k
views
Comment: C: PharmGKB haplotype table
7.1 years ago by BAGeno ▴ 190
0
votes
1
reply
2.3k
views
Comment: C: PharmGKB haplotype table
7.1 years ago by BAGeno ▴ 190
1
vote
5
replies
2.3k
views
PharmGKB haplotype table
gene SNP dbsnp pharmgkb
updated 7.1 years ago by 89k • written 7.1 years ago by ▴ 190
0
votes
1
reply
1.6k
views
Haplotype analysis from phased vcf
vcf phased haplotype
7.1 years ago by BAGeno ▴ 190
0
votes
1
reply
6.5k
views
Comment: C: Temporary Directory Problem in GATK4
7.2 years ago by BAGeno ▴ 190
4
votes
2
replies
2.4k
views
How to check which samples has more uncalled genotypes in multi-sample vcf
genotype missing sample
updated 7.3 years ago by 166k • written 7.3 years ago by ▴ 190
0
votes
1
reply
3.4k
views
Comment: C: Problem with allele number in vcf
7.3 years ago by BAGeno ▴ 190
0
votes
1
reply
3.4k
views
Comment: C: Problem with allele number in vcf
7.3 years ago by BAGeno ▴ 190
2
votes
8
replies
3.4k
views
Problem with allele number in vcf
vcf allele number genotype
updated 7.3 years ago by ▴ 130 • written 7.3 years ago by ▴ 190
0
votes
1
reply
2.7k
views
Comment: C: Location of intronic SNPs from exons
7.3 years ago by BAGeno ▴ 190
8
votes
5
replies
2.7k
views
Location of intronic SNPs from exons
exon position introns vep
updated 7.3 years ago by 24k • written 7.3 years ago by ▴ 190
0
votes
0
replies
1.1k
views
Finding overlapping regions in two file along with their associated information
bedtools overlapping regions genes
7.3 years ago by BAGeno ▴ 190
0
votes
0
replies
2.1k
views
Comment: C: Exonic SNPs extraction
7.3 years ago by BAGeno ▴ 190
0
votes
0
replies
4.7k
views
Comment: C: Updating rsids from one version of dbSNP to another
7.3 years ago by BAGeno ▴ 190
0
votes
1
reply
7.5k
views
Comment: C: How to run bcftools roh with multiple samples vcf
7.4 years ago by BAGeno ▴ 190
0
votes
1
reply
7.5k
views
Comment: C: How to run bcftools roh with multiple samples vcf
7.4 years ago by BAGeno ▴ 190
0
votes
0
replies
7.5k
views
Comment: C: How to run bcftools roh with multiple samples vcf
7.4 years ago by BAGeno ▴ 190
3
votes
8
replies
7.5k
views
How to run bcftools roh with multiple samples vcf
bcftools roh
updated 7.4 years ago by 16k • written 7.4 years ago by ▴ 190
86 results • Page 1 of 2
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