Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.2k
views
Comment: C: Galaxy Bowtie2 fastq recognition
8.3 years ago by rbronste ▴ 420
0
votes
5
replies
2.2k
views
Galaxy Bowtie2 fastq recognition
galaxy Bowtie2 fastq
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
0
replies
3.3k
views
Comment: C: how to know the putative function of a gene
8.3 years ago by rbronste ▴ 420
0
votes
0
replies
11k
views
Comment: C: Removing PCR duplicates - fastq or BAM?
8.3 years ago by rbronste ▴ 420
23
votes
9
replies
11k
views
Removing PCR duplicates - fastq or BAM?
alignment BAM fastq duplicates
updated 8.3 years ago by 103k • written 8.3 years ago by ▴ 420
0
votes
2
replies
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
42k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
8.3 years ago by rbronste ▴ 420
0
votes
0
replies
3.7k
views
Comment: C: Samtools flagstat unpaired reads
8.3 years ago by rbronste ▴ 420
1
vote
3
replies
3.7k
views
Samtools flagstat unpaired reads
samtools BAM Bowtie2
updated 8.3 years ago by 166k • written 8.3 years ago by ▴ 420
2
votes
2
replies
5.5k
views
Duplicates in ATAC-seq data
ATAC-seq picard samtools rmdup duplicates
updated 8.3 years ago by ★ 3.5k • written 8.3 years ago by ▴ 420
0
votes
2
replies
2.6k
views
Bowtie2 parallelization on cluster
Bowtie2 alignment
updated 8.3 years ago by ▴ 130 • written 8.3 years ago by ▴ 420
0
votes
1
reply
19k
views
Trouble installing R package Cairo
R Cairo
updated 8.3 years ago by ▴ 330 • written 8.3 years ago by ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.3 years ago by rbronste ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
0
replies
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
0
replies
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
4.6k
views
Comment: C: Closest gene to set of intervals
8.4 years ago by rbronste ▴ 420
4
votes
21
replies
4.6k
views
Closest gene to set of intervals
bedops bedtools
updated 8.4 years ago by ★ 1.5k • written 8.4 years ago by ▴ 420
4
votes
1
reply
2.7k
views
deepTools - plotHeatmap, move colorbar to the bottom
deepTools heatmap
updated 8.4 years ago by 105k • written 8.4 years ago by ▴ 420
0
votes
0
replies
5.9k
views
Comment: C: converting bed file to heatmap data
8.4 years ago by rbronste ▴ 420
0
votes
0
replies
5.9k
views
Comment: C: converting bed file to heatmap data
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
11k
views
Comment: C: Quickly Plotting Distribution Of Points From Bed File?
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
11k
views
Comment: C: Quickly Plotting Distribution Of Points From Bed File?
8.4 years ago by rbronste ▴ 420
0
votes
3
replies
1.4k
views
Table Browser refGene identifiers question
Table Browser UCSC
updated 8.4 years ago by 166k • written 8.4 years ago by ▴ 420
0
votes
0
replies
1.4k
views
Comment: C: Table Browser refGene identifiers question
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
9.0k
views
Comment: C: Table browser +/- 2Kb of TSS export
8.4 years ago by rbronste ▴ 420
0
votes
1
reply
2.0k
views
Comment: C: Chromatin Accessibility Data and RNA-seq
8.4 years ago by rbronste ▴ 420
4
votes
4
replies
2.0k
views
Chromatin Accessibility Data and RNA-seq
RNA-Seq chromatin accessibility
updated 8.4 years ago by 13k • written 8.4 years ago by ▴ 420
1
vote
2
replies
1.6k
views
Peak ident near highly expressed genes
ChIP-Seq RNA-Seq bedops
8.4 years ago by rbronste ▴ 420
0
votes
0
replies
1.4k
views
Normalizing CENTIPEDE footprint plots
centipede ATAC-seq footprinting ChIP-Seq R
updated 8.5 years ago by 20 • written 8.6 years ago by ▴ 420
0
votes
1
reply
3.6k
views
Comment: C: Calculating FPKM values from HT-counts
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
4.0k
views
Comment: C: Getting avg gene length from GTF (for all splice isoforms)
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
4.0k
views
Comment: C: Getting avg gene length from GTF (for all splice isoforms)
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
4.0k
views
Comment: C: Getting avg gene length from GTF (for all splice isoforms)
8.5 years ago by rbronste ▴ 420
2
votes
8
replies
4.0k
views
Getting avg gene length from GTF (for all splice isoforms)
RNA-Seq UCSC table browser GTF
updated 8.5 years ago by 36k • written 8.5 years ago by ▴ 420
0
votes
1
reply
3.6k
views
Comment: C: Calculating FPKM values from HT-counts
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
3.6k
views
Comment: C: Calculating FPKM values from HT-counts
8.5 years ago by rbronste ▴ 420
0
votes
1
reply
2.4k
views
Comment: C: Setting up a lab wiki
8.5 years ago by rbronste ▴ 420
10
votes
6
replies
2.4k
views
Setting up a lab wiki
wiki data analysis and organization
updated 8.5 years ago by 27k • written 8.5 years ago by ▴ 420
2
votes
9
replies
3.6k
views
Calculating FPKM values from HT-counts
FPKM RPKM RNA-Seq
updated 8.5 years ago by 105k • written 8.5 years ago by ▴ 420
0
votes
1
reply
3.1k
views
Comment: C: bedops wig2bed issue
updated 8.5 years ago by 154k • written 8.5 years ago by ▴ 420
0
votes
1
reply
3.1k
views
Comment: C: bedops wig2bed issue
8.5 years ago by rbronste ▴ 420
0
votes
5
replies
3.1k
views
bedops wig2bed issue
bedops wig2bed
8.5 years ago by rbronste ▴ 420
294 results • Page 5 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6