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153
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Music2 human to mouse deconvolution
deconvolution liftover music2
9 weeks ago by rbronste ▴ 420
0
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0
replies
251
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scVelo cell transitions from marker gene expressing cells
velocity scvelo RNA
5 months ago by rbronste ▴ 420
2
votes
2
replies
417
views
Splice junction SNPs
SNP splicing isoform
updated 6 months ago by 22k • written 6 months ago by ▴ 420
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0
replies
701
views
Comment: Comment: STARsolo seg fault without readMapNumber flag
6 months ago by rbronste ▴ 420
0
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1
reply
701
views
Comment: Comment: STARsolo seg fault without readMapNumber flag
6 months ago by rbronste ▴ 420
0
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2
replies
701
views
Comment: Comment: STARsolo seg fault without readMapNumber flag
6 months ago by rbronste ▴ 420
0
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1
reply
701
views
Comment: Comment: STARsolo seg fault without readMapNumber flag
6 months ago by rbronste ▴ 420
3
votes
9
replies
701
views
STARsolo seg fault without readMapNumber flag
STAR RNA-seq STARsolo Velocyto
updated 6 months ago by 43k • written 6 months ago by ▴ 420
0
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0
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676
views
Comment: Comment: Adding Salmon Alevin counts to clustered Seurat object
9 months ago by rbronste ▴ 420
0
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1
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676
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Comment: Comment: Adding Salmon Alevin counts to clustered Seurat object
9 months ago by rbronste ▴ 420
2
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4
replies
676
views
Adding Salmon Alevin counts to clustered Seurat object
salmon seurat alevin
9 months ago by rbronste ▴ 420
0
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0
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1.2k
views
Converting objects between Seurat versions
Seurat
10 months ago by rbronste ▴ 420
0
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1
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874
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Comment: Comment: RangedSummarizedExperiment to Sparse Matrix
14 months ago by rbronste ▴ 420
1
vote
3
replies
874
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RangedSummarizedExperiment to Sparse Matrix
dgCMatrix sparse RangedSummarizedExperiment matrix
updated 14 months ago by 82k • written 14 months ago by ▴ 420
0
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0
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818
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Comment: Comment: Combining TF PWMs
16 months ago by rbronste ▴ 420
0
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0
replies
818
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Comment: Comment: Combining TF PWMs
16 months ago by rbronste ▴ 420
1
vote
3
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818
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Combining TF PWMs
TF Jaspar motif PWM
16 months ago by rbronste ▴ 420
0
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0
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358
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Signac MACS2 peak shape question
snATAC-seq snRNA-seq signac multiome seurat
21 months ago by rbronste ▴ 420
0
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0
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654
views
Comment: Comment: Adding to 10X genome.fa and genes.gtf files
2.0 years ago by rbronste ▴ 420
2
votes
2
replies
654
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Adding to 10X genome.fa and genes.gtf files
10x Genomics multiome scRNA-seq
2.0 years ago by rbronste ▴ 420
0
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0
replies
630
views
Comment: Comment: Identifying rosa locus expression in snRNA-seq
2.1 years ago by rbronste ▴ 420
0
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0
replies
630
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Comment: Comment: Identifying rosa locus expression in snRNA-seq
2.1 years ago by rbronste ▴ 420
0
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3
replies
630
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Identifying rosa locus expression in snRNA-seq
rosa locus snRNA-seq reporter scRNA-seq
2.1 years ago by rbronste ▴ 420
2
votes
3
replies
2.9k
views
liftOver narrowPeak file
liftOver Assembly
updated 2.5 years ago by ▴ 50 • written 7.3 years ago by ▴ 420
1
vote
2
replies
3.5k
views
BED intersects/overlaps output for Venn diagrams - single column
bedtools bedops
updated 3.6 years ago by ▴ 20 • written 6.9 years ago by ▴ 420
3
votes
12
replies
6.9k
views
Blacklisted regions for mm10
ChIP-Seq blacklisted regions
updated 3.7 years ago by 82k • written 7.1 years ago by ▴ 420
4
votes
3
replies
942
views
Seurat code availability for published papers
seurat scRNA-seq
4.0 years ago by rbronste ▴ 420
5
votes
2
replies
2.9k
views
Official gene symbol list to BED file
bed gene symbol DEseq2
updated 4.2 years ago by ▴ 20 • written 6.3 years ago by ▴ 420
0
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1
reply
1.5k
views
Comment: C: grep sorting question
4.3 years ago by rbronste ▴ 420
0
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0
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1.5k
views
Comment: C: grep sorting question
4.3 years ago by rbronste ▴ 420
0
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1
reply
1.5k
views
Comment: C: grep sorting question
4.3 years ago by rbronste ▴ 420
3
votes
11
replies
1.5k
views
grep sorting question
grep awk sed bash unix
updated 4.3 years ago by 43k • written 4.3 years ago by ▴ 420
0
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1
reply
1.5k
views
Comment: C: grep sorting question
4.3 years ago by rbronste ▴ 420
0
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1
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5.0k
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Comment: Comment: multiple bed - merge regions IF overlapping more than xx percent of size
updated 16 months ago by 43k • written 4.3 years ago by ▴ 420
0
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0
replies
748
views
ggplot2 loess curve application to 2 dataframes
ggplot2 ggplot
4.3 years ago by rbronste ▴ 420
5
votes
3
replies
2.6k
views
EnhancedVolcano R pdf export size
EnhancedVolcano volcano plot R
updated 4.3 years ago by 11k • written 4.3 years ago by ▴ 420
0
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1
reply
2.6k
views
Comment: C: EnhancedVolcano R pdf export size
4.3 years ago by rbronste ▴ 420
0
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0
replies
756
views
Comment: C: Difficult filtering scenario of BED file
4.3 years ago by rbronste ▴ 420
2
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3
replies
756
views
Difficult filtering scenario of BED file
awk sed grep
4.3 years ago by rbronste ▴ 420
4
votes
6
replies
864
views
awk for interval midpoints and length
awk
updated 4.3 years ago by 11k • written 4.3 years ago by ▴ 420
0
votes
1
reply
2.6k
views
Comment: C: How to extend variable length intervals to the same final length?
4.3 years ago by rbronste ▴ 420
1
vote
0
replies
10k
views
Comment: C: Enhanced Volcano removal of labels
4.3 years ago by rbronste ▴ 420
12
votes
4
replies
10k
views
Enhanced Volcano removal of labels
EnhancedVolcano volcano plot
updated 4.4 years ago by 88k • written 4.4 years ago by ▴ 420
0
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0
replies
10k
views
Comment: C: Enhanced Volcano removal of labels
4.4 years ago by rbronste ▴ 420
0
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1
reply
4.3k
views
Comment: C: Color labeled points in Enhanced Volcano
4.4 years ago by rbronste ▴ 420
4
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5
replies
4.3k
views
Color labeled points in Enhanced Volcano
volcano plot EnhancedVolcano
4.4 years ago by rbronste ▴ 420
0
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1
reply
4.3k
views
Comment: C: Color labeled points in Enhanced Volcano
4.4 years ago by rbronste ▴ 420
8
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3
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2.6k
views
Adding ggplot2 chromosome position variable
ggplot2 plot genomic ranges R
updated 4.4 years ago by ★ 3.4k • written 4.5 years ago by ▴ 420
2
votes
2
replies
826
views
Plotting matrix of values around specific genomic position
R data.frame matrix ggplot2
updated 4.4 years ago by 11k • written 4.4 years ago by ▴ 420
0
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1
reply
2.5k
views
Comment: C: Common gene names list to BED with +/- TSS intervals
4.4 years ago by rbronste ▴ 420
291 results • Page 1 of 6
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