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1
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2
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Where to find known sites for mm39 used by GATK4 BaseRecalibrator?
BaseRecalibrator mouse gatk
11 months ago by 乙 ▴ 190
1
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0
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548
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Answer: Answer: Where to find known sites for mm39 used by GATK4 BaseRecalibrator?
11 months ago by 乙 ▴ 190
0
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0
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548
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Comment: Comment: Where to find known sites for mm39 used by GATK4 BaseRecalibrator?
11 months ago by 乙 ▴ 190
21
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24
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15k
views
8 follow
bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing methods by Illumina ?
bcl2fastq2 --use-bases-mask sequencing illumina
updated 18 months ago by ▴ 260 • written 4.4 years ago by ▴ 190
0
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1
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1.7k
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Comment: C: Is there a tool to find the correct percentage of duplication levels in FastQ ?
2.7 years ago by 乙 ▴ 190
11
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18
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1.7k
views
6 follow
Is there a tool to find the correct percentage of duplication levels in FastQ ?
sequencing fastq
updated 2.8 years ago by 127k • written 2.8 years ago by ▴ 190
0
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0
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1.7k
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Comment: C: Is there a tool to find the correct percentage of duplication levels in FastQ ?
2.8 years ago by 乙 ▴ 190
0
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1
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1.7k
views
Comment: C: Is there a tool to find the correct percentage of duplication levels in FastQ ?
2.8 years ago by 乙 ▴ 190
0
votes
1
reply
1.7k
views
Comment: C: Is there a tool to find the correct percentage of duplication levels in FastQ ?
2.8 years ago by 乙 ▴ 190
0
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1
reply
1.7k
views
Comment: C: Is there a tool to find the correct percentage of duplication levels in FastQ ?
2.8 years ago by 乙 ▴ 190
0
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0
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693
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Comment: C: Is it possible to get the Codons for an intron/splice mutation given the chromos
2.8 years ago by 乙 ▴ 190
0
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2
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693
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Is it possible to get the Codons for an intron/splice mutation given the chromosome and position?
codons introns
2.8 years ago by 乙 ▴ 190
6
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5
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637
views
Is it possible to convert NC_ to NP_ for RefSeq ?
RefSeq
2.9 years ago by 乙 ▴ 190
0
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0
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637
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Comment: C: Is it possible to get convert all NC_ to NP_ for RefSeq ?
2.9 years ago by 乙 ▴ 190
0
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2
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637
views
Comment: C: Is it possible to get convert all NC_ to NP_ for RefSeq ?
2.9 years ago by 乙 ▴ 190
1
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0
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1.5k
views
What are the min/max of the MaxEntScan software ?
maxentscan
3.1 years ago by 乙 ▴ 190
1
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0
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645
views
Any changes to the frequencies of gnomAD v2.1 liftover ?
gnomAD liftovert hg19 hg38
3.2 years ago by 乙 ▴ 190
4
votes
9
replies
1.3k
views
Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37 ?
Ensembl RefSeq transcripts genes
updated 3.2 years ago by 23k • written 3.2 years ago by ▴ 190
0
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1
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1.3k
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Comment: C: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
3.2 years ago by 乙 ▴ 190
0
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0
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1.3k
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Comment: C: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
3.2 years ago by 乙 ▴ 190
0
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1
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1.3k
views
Comment: C: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
3.2 years ago by 乙 ▴ 190
0
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0
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1.6k
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Comment: C: Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
3.6 years ago by 乙 ▴ 190
0
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1
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1.6k
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Comment: C: Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
3.6 years ago by 乙 ▴ 190
0
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0
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3.0k
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Comment: C: Should the expression data be centered before PCA?
3.6 years ago by 乙 ▴ 190
0
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1
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1.6k
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Comment: C: Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
3.6 years ago by 乙 ▴ 190
1
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2
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1.6k
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Comment: C: Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
3.6 years ago by 乙 ▴ 190
3
votes
12
replies
1.6k
views
Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
decompression bcl2fastq2 fastq bcl raw
3.6 years ago by 乙 ▴ 190
13
votes
16
replies
2.0k
views
8 follow
RNA-seq: is there a way to get the variability between biological replicates ?
RNA-Seq
updated 4.0 years ago by 8.2k • written 4.0 years ago by ▴ 190
0
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0
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2.0k
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Comment: C: RNA-seq: is there a way to get the variability between biological replicates ?
4.0 years ago by 乙 ▴ 190
0
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1
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2.0k
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Comment: C: RNA-seq: is there a way to get the variability between biological replicates ?
4.0 years ago by 乙 ▴ 190
0
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1
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2.0k
views
Comment: C: RNA-seq: is there a way to get the variability between biological replicates ?
4.0 years ago by 乙 ▴ 190
1
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1
reply
2.0k
views
Comment: C: RNA-seq: is there a way to get the variability between biological replicates ?
4.0 years ago by 乙 ▴ 190
0
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0
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896
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Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
15
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14
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896
views
RNA-seq: Is it worth to analyze case vs control separately to have a % similarity ?
RNA-Seq
updated 4.0 years ago by ★ 5.2k • written 4.0 years ago by ▴ 190
0
votes
0
replies
896
views
Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
1
vote
0
replies
896
views
Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
0
votes
1
reply
896
views
Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
0
votes
1
reply
896
views
Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
0
votes
1
reply
896
views
Comment: C: RNA-seq: Is it worth to analyze case vs control separately to have a % similarit
4.0 years ago by 乙 ▴ 190
1
vote
1
reply
3.5k
views
Comment: C: What does CSQ means in a VCF file annotated by VEP ?
4.0 years ago by 乙 ▴ 190
7
votes
3
replies
3.5k
views
What does CSQ means in a VCF file annotated by VEP ?
VCF CSQ
updated 4.0 years ago by 47k • written 4.0 years ago by ▴ 190
1
vote
1
reply
889
views
Comment: C: MySQL: Mapping GRCh38 coordinates to GRCh37 using ensembldb
4.2 years ago by 乙 ▴ 190
1
vote
3
replies
889
views
MySQL: Mapping GRCh38 coordinates to GRCh37 using ensembldb
ensembl MySQL Assembly mapping
updated 4.2 years ago by 153k • written 4.2 years ago by ▴ 190
0
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1
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15k
views
Comment: C: bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing m
4.4 years ago by 乙 ▴ 190
4
votes
15
replies
6.3k
views
9 follow
Using Circos plot to visualize RNA-seq data
Circos RNA-Seq visualization
updated 4.6 years ago by ★ 3.4k • written 4.7 years ago by ▴ 190
1
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1
reply
6.3k
views
Comment: C: Using Circos plot to visualize RNA-seq data
4.7 years ago by 乙 ▴ 190
0
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1
reply
6.3k
views
Comment: C: Using Circos plot to visualize RNA-seq data
4.7 years ago by 乙 ▴ 190
0
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0
replies
6.3k
views
Comment: C: Using Circos plot to visualize RNA-seq data
4.7 years ago by 乙 ▴ 190
4
votes
7
replies
2.2k
views
HTSeq-count [Python] is not properly counting reads like Genomic Alignments [R] ?
RNA-Seq HTSeq-count GenomicAlignments
4.8 years ago by 乙 ▴ 190
0
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1
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2.2k
views
Comment: C: HTSeq-count [Python] is not properly counting reads like Genomic Alignments [R]
4.8 years ago by 乙 ▴ 190
64 results • Page 1 of 2
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