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Comment: C: How to annotate variants offline using ANNOVAR?
5.2 years ago by vinayjrao ▴ 260
0
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4
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1.5k
views
How to annotate variants offline using ANNOVAR?
SNP
5.2 years ago by vinayjrao ▴ 260
0
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0
replies
722
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Filtering wANNOVAR output on terminal
SNP
5.2 years ago by vinayjrao ▴ 260
1
vote
1
reply
939
views
What type of duplicates are to be removed while analyzing whole exome data?
SNP Exome-Seq
5.2 years ago by vinayjrao ▴ 260
7
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5
replies
1.6k
views
Correlation between coverage and variant calling
SNP variant-calling Exome-Seq
updated 23 months ago by 45k • written 5.6 years ago by ▴ 260
0
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0
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1.6k
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Comment: C: Correlation between coverage and variant calling
5.6 years ago by vinayjrao ▴ 260
2
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14
replies
10k
views
Ballgown Error in file(file, "rt") : invalid 'description' argument
RNA-Seq ballgown
updated 6.1 years ago by ▴ 10 • written 8.1 years ago by ▴ 260
12
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1
reply
63k
views
Interpreting GSEA enrichment plots/results
RNA-Seq gsea
updated 6.1 years ago by ▴ 70 • written 6.6 years ago by ▴ 260
3
votes
2
replies
1.4k
views
Filtering 2-fold differentially expressed genes
R Microarray
updated 6.2 years ago by 11k • written 6.2 years ago by ▴ 260
0
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0
replies
1.5k
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Comment: C: Averaging multiple columns
6.2 years ago by vinayjrao ▴ 260
0
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0
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1.5k
views
Comment: C: Averaging multiple columns
6.2 years ago by vinayjrao ▴ 260
4
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4
replies
1.5k
views
Averaging multiple columns
R shell
updated 6.2 years ago by 12k • written 6.2 years ago by ▴ 260
2
votes
1
reply
7.4k
views
How to merge 2 dataframes based on common column names?
R
updated 6.3 years ago by 5.9k • written 6.3 years ago by ▴ 260
0
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1
reply
1.8k
views
Comment: C: Probe Sequence Missing from Agilent Data
6.3 years ago by vinayjrao ▴ 260
0
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1
reply
1.8k
views
Comment: C: Probe Sequence Missing from Agilent Data
6.3 years ago by vinayjrao ▴ 260
0
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1
reply
7.4k
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Comment: C: Single-color Agilent array analyzing in R
6.3 years ago by vinayjrao ▴ 260
0
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0
replies
1.1k
views
log2FC Difference Across Control Samples
microarray agilent
6.3 years ago by vinayjrao ▴ 260
2
votes
5
replies
1.8k
views
Probe Sequence Missing from Agilent Data
microarray agilent
6.3 years ago by vinayjrao ▴ 260
0
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0
replies
23k
views
Comment: C: Microarray: How To Select One Of Multiple Probes Corresponding To A Gene
6.3 years ago by vinayjrao ▴ 260
0
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1
reply
7.4k
views
Comment: C: Single-color Agilent array analyzing in R
6.3 years ago by vinayjrao ▴ 260
0
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0
replies
1.7k
views
Comment: C: Plotting TCGA's HM450 data
6.7 years ago by vinayjrao ▴ 260
0
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0
replies
1.7k
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Comment: C: Plotting TCGA's HM450 data
6.7 years ago by vinayjrao ▴ 260
0
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1
reply
1.7k
views
Comment: C: Plotting TCGA's HM450 data
6.7 years ago by vinayjrao ▴ 260
2
votes
5
replies
1.7k
views
Plotting TCGA's HM450 data
bisulfite-seq HM450 methylation TCGA
updated 6.7 years ago by 89k • written 6.7 years ago by ▴ 260
0
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1
reply
29k
views
Comment: C: Interpretation of Beta values : Methylation data
6.7 years ago by vinayjrao ▴ 260
0
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0
replies
3.9k
views
Comment: C: Normalizing RPPA data counts from TCGA
6.7 years ago by vinayjrao ▴ 260
0
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0
replies
3.2k
views
Comment: C: Can gffread extract specific region sequences from vcf or fasta file?
6.7 years ago by vinayjrao ▴ 260
0
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1
reply
3.9k
views
Comment: C: Normalizing RPPA data counts from TCGA
6.7 years ago by vinayjrao ▴ 260
0
votes
1
reply
3.9k
views
Comment: C: Normalizing RPPA data counts from TCGA
6.7 years ago by vinayjrao ▴ 260
2
votes
6
replies
3.9k
views
Normalizing RPPA data counts from TCGA
tcga protein expression rppa
updated 6.8 years ago by 89k • written 6.8 years ago by ▴ 260
0
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0
replies
3.2k
views
Comment: C: Is there a code to find consensus motif
7.1 years ago by vinayjrao ▴ 260
0
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1
reply
3.2k
views
Comment: C: Is there a code to find consensus motif
7.1 years ago by vinayjrao ▴ 260
0
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1
reply
3.2k
views
Comment: C: Is there a code to find consensus motif
7.1 years ago by vinayjrao ▴ 260
2
votes
6
replies
3.2k
views
Is there a code to find consensus motif
C awk shell python
updated 7.1 years ago by 9.0k • written 7.1 years ago by ▴ 260
0
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0
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2.0k
views
Comment: C: Need help in GSEA analysis and interpretation
7.2 years ago by vinayjrao ▴ 260
2
votes
4
replies
2.0k
views
Need help in GSEA analysis and interpretation
gsea barcode plot rna-seq
7.2 years ago by vinayjrao ▴ 260
0
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0
replies
2.0k
views
Comment: C: Need help in GSEA analysis and interpretation
7.2 years ago by vinayjrao ▴ 260
0
votes
0
replies
2.6k
views
Comment: C: Effect of splice site mutations in mouse
7.2 years ago by vinayjrao ▴ 260
0
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1
reply
2.6k
views
Comment: C: Effect of splice site mutations in mouse
7.2 years ago by vinayjrao ▴ 260
0
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1
reply
2.6k
views
Comment: C: Effect of splice site mutations in mouse
7.2 years ago by vinayjrao ▴ 260
4
votes
17
replies
4.2k
views
Selecting intergenic regions
grep shell
updated 2.5 years ago by 45k • written 7.3 years ago by ▴ 260
0
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0
replies
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
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1
reply
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
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1
reply
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
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0
replies
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
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0
replies
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
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1
reply
4.2k
views
Comment: C: Selecting intergenic regions
7.3 years ago by vinayjrao ▴ 260
0
votes
1
reply
3.1k
views
Comment: C: converting probeID to entrezID
7.3 years ago by vinayjrao ▴ 260
11
votes
7
replies
18k
views
6 follow
How to extract specific rows based on row number from a file
shell
updated 2.5 years ago by 45k • written 7.4 years ago by ▴ 260
0
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1
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18k
views
Comment: C: How to extract specific rows based on row number from a file
7.4 years ago by vinayjrao ▴ 260
184 results • Page 2 of 4
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