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Comment: C: How to annotate variants offline using ANNOVAR?
3.8 years ago by vinayjrao ▴ 250
0
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4
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1.1k
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How to annotate variants offline using ANNOVAR?
SNP
3.8 years ago by vinayjrao ▴ 250
0
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0
replies
564
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Filtering wANNOVAR output on terminal
SNP
3.8 years ago by vinayjrao ▴ 250
1
vote
1
reply
741
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What type of duplicates are to be removed while analyzing whole exome data?
SNP Exome-Seq
3.8 years ago by vinayjrao ▴ 250
7
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5
replies
1.0k
views
Correlation between coverage and variant calling
SNP variant-calling Exome-Seq
updated 6 months ago by 43k • written 4.2 years ago by ▴ 250
0
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0
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1.0k
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Comment: C: Correlation between coverage and variant calling
4.2 years ago by vinayjrao ▴ 250
2
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14
replies
9.0k
views
Ballgown Error in file(file, "rt") : invalid 'description' argument
RNA-Seq ballgown
updated 4.7 years ago by ▴ 10 • written 6.7 years ago by ▴ 250
11
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1
reply
49k
views
Interpreting GSEA enrichment plots/results
RNA-Seq gsea
updated 4.7 years ago by ▴ 60 • written 5.2 years ago by ▴ 250
3
votes
2
replies
1.0k
views
Filtering 2-fold differentially expressed genes
R Microarray
updated 4.8 years ago by 11k • written 4.8 years ago by ▴ 250
0
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0
replies
1.1k
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Comment: C: Averaging multiple columns
4.8 years ago by vinayjrao ▴ 250
0
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0
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1.1k
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Comment: C: Averaging multiple columns
4.8 years ago by vinayjrao ▴ 250
4
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4
replies
1.1k
views
Averaging multiple columns
R shell
updated 4.8 years ago by 11k • written 4.8 years ago by ▴ 250
2
votes
1
reply
6.6k
views
How to merge 2 dataframes based on common column names?
R
updated 4.9 years ago by 5.8k • written 4.9 years ago by ▴ 250
0
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1
reply
1.4k
views
Comment: C: Probe Sequence Missing from Agilent Data
4.9 years ago by vinayjrao ▴ 250
0
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1
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1.4k
views
Comment: C: Probe Sequence Missing from Agilent Data
4.9 years ago by vinayjrao ▴ 250
0
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1
reply
6.3k
views
Comment: C: Single-color Agilent array analyzing in R
4.9 years ago by vinayjrao ▴ 250
0
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0
replies
842
views
log2FC Difference Across Control Samples
microarray agilent
4.9 years ago by vinayjrao ▴ 250
2
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5
replies
1.4k
views
Probe Sequence Missing from Agilent Data
microarray agilent
4.9 years ago by vinayjrao ▴ 250
0
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0
replies
21k
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Comment: C: Microarray: How To Select One Of Multiple Probes Corresponding To A Gene
4.9 years ago by vinayjrao ▴ 250
0
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1
reply
6.3k
views
Comment: C: Single-color Agilent array analyzing in R
4.9 years ago by vinayjrao ▴ 250
0
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0
replies
1.3k
views
Comment: C: Plotting TCGA's HM450 data
5.3 years ago by vinayjrao ▴ 250
0
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0
replies
1.3k
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Comment: C: Plotting TCGA's HM450 data
5.3 years ago by vinayjrao ▴ 250
0
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1
reply
1.3k
views
Comment: C: Plotting TCGA's HM450 data
5.3 years ago by vinayjrao ▴ 250
2
votes
5
replies
1.3k
views
Plotting TCGA's HM450 data
bisulfite-seq HM450 methylation TCGA
updated 5.3 years ago by 87k • written 5.3 years ago by ▴ 250
0
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1
reply
25k
views
Comment: C: Interpretation of Beta values : Methylation data
5.3 years ago by vinayjrao ▴ 250
0
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0
replies
3.1k
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Comment: C: Normalizing RPPA data counts from TCGA
5.3 years ago by vinayjrao ▴ 250
0
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0
replies
2.5k
views
Comment: C: Can gffread extract specific region sequences from vcf or fasta file?
5.3 years ago by vinayjrao ▴ 250
0
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1
reply
3.1k
views
Comment: C: Normalizing RPPA data counts from TCGA
5.3 years ago by vinayjrao ▴ 250
0
votes
1
reply
3.1k
views
Comment: C: Normalizing RPPA data counts from TCGA
5.3 years ago by vinayjrao ▴ 250
2
votes
6
replies
3.1k
views
Normalizing RPPA data counts from TCGA
tcga protein expression rppa
updated 5.4 years ago by 87k • written 5.4 years ago by ▴ 250
0
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0
replies
2.4k
views
Comment: C: Is there a code to find consensus motif
5.7 years ago by vinayjrao ▴ 250
0
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1
reply
2.4k
views
Comment: C: Is there a code to find consensus motif
5.7 years ago by vinayjrao ▴ 250
0
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1
reply
2.4k
views
Comment: C: Is there a code to find consensus motif
5.7 years ago by vinayjrao ▴ 250
2
votes
6
replies
2.4k
views
Is there a code to find consensus motif
C awk shell python
updated 5.7 years ago by 8.7k • written 5.7 years ago by ▴ 250
0
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0
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1.5k
views
Comment: C: Need help in GSEA analysis and interpretation
5.8 years ago by vinayjrao ▴ 250
2
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4
replies
1.5k
views
Need help in GSEA analysis and interpretation
gsea barcode plot rna-seq
5.8 years ago by vinayjrao ▴ 250
0
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0
replies
1.5k
views
Comment: C: Need help in GSEA analysis and interpretation
5.8 years ago by vinayjrao ▴ 250
0
votes
0
replies
1.9k
views
Comment: C: Effect of splice site mutations in mouse
5.8 years ago by vinayjrao ▴ 250
0
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1
reply
1.9k
views
Comment: C: Effect of splice site mutations in mouse
5.8 years ago by vinayjrao ▴ 250
0
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1
reply
1.9k
views
Comment: C: Effect of splice site mutations in mouse
5.8 years ago by vinayjrao ▴ 250
4
votes
17
replies
3.2k
views
Selecting intergenic regions
grep shell
updated 13 months ago by 43k • written 5.9 years ago by ▴ 250
0
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0
replies
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
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1
reply
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
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1
reply
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
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0
replies
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
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0
replies
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
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1
reply
3.2k
views
Comment: C: Selecting intergenic regions
5.9 years ago by vinayjrao ▴ 250
0
votes
1
reply
2.2k
views
Comment: C: converting probeID to entrezID
5.9 years ago by vinayjrao ▴ 250
11
votes
7
replies
16k
views
6 follow
How to extract specific rows based on row number from a file
shell
updated 13 months ago by 43k • written 6.0 years ago by ▴ 250
0
votes
1
reply
16k
views
Comment: C: How to extract specific rows based on row number from a file
6.0 years ago by vinayjrao ▴ 250
184 results • Page 2 of 4
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