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5
votes
4
replies
1.1k
views
Protein fold topology search web-server
topology structure protein
updated 11 months ago by ★ 2.0k • written 11 months ago by ▴ 110
0
votes
1
reply
1.1k
views
Comment: Comment: Protein fold topology search web-server
11 months ago by johnnytam100 ▴ 110
6
votes
6
replies
3.3k
views
Mapping PDB ID + chain ID to UniProt ID
uniprot pdb
updated 17 months ago by ★ 2.0k • written 18 months ago by ▴ 110
2
votes
0
replies
3.3k
views
Answer: Answer: Mapping PDB ID + chain ID to UniProt ID
18 months ago by johnnytam100 ▴ 110
0
votes
0
replies
3.3k
views
Comment: Comment: Mapping PDB ID + chain ID to UniProt ID
18 months ago by johnnytam100 ▴ 110
0
votes
1
reply
3.3k
views
Comment: Comment: Mapping PDB ID + chain ID to UniProt ID
18 months ago by johnnytam100 ▴ 110
4
votes
3
replies
1.0k
views
Where to download a curated dataframe of the full archive of UniProt?
uniprot
updated 2.2 years ago by 54k • written 2.2 years ago by ▴ 110
0
votes
2
replies
875
views
Comment: Comment: Mapping NCBI taxID to evolution time?
2.3 years ago by johnnytam100 ▴ 110
1
vote
4
replies
875
views
Mapping NCBI taxID to evolution time?
evolution taxonomy
updated 2.3 years ago by 54k • written 2.3 years ago by ▴ 110
0
votes
1
reply
605
views
Automating form submission in webserver for prediction job
submission python form
updated 2.5 years ago by 13k • written 2.5 years ago by ▴ 110
1
vote
7
replies
1.9k
views
Statistics of amino acid usage of multiple aligned sequences?
alignment
updated 2.8 years ago by 21k • written 5.1 years ago by ▴ 110
8
votes
5
replies
1.0k
views
Why could we infer a physical time scale (e.g. a billion year) from a phylogenetic analysis?
phylogeny phylogenetic tree
4.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
1.9k
views
Comment: C: Statistics of amino acid usage of multiple aligned sequences?
5.1 years ago by johnnytam100 ▴ 110
0
votes
0
replies
1.9k
views
Comment: C: Statistics of amino acid usage of multiple aligned sequences?
5.1 years ago by johnnytam100 ▴ 110
25
votes
27
replies
2.9k
views
10 follow
So frustrated compiling necessary packages in a linux system
linux compile build
updated 5.4 years ago by ▴ 20 • written 5.5 years ago by ▴ 110
0
votes
1
reply
2.2k
views
Extracting sequence names from phylogenetic tree (in newick format or MEGA)?
phylogenetic tree
5.4 years ago by johnnytam100 ▴ 110
0
votes
1
reply
5.6k
views
Comment: C: R: scaling axis for different limits in hist
5.4 years ago by johnnytam100 ▴ 110
0
votes
0
replies
5.6k
views
Comment: C: R: scaling axis for different limits in hist
5.4 years ago by johnnytam100 ▴ 110
1
vote
5
replies
5.6k
views
R: scaling axis for different limits in hist
hist R
updated 5.4 years ago by 11k • written 5.4 years ago by ▴ 110
0
votes
0
replies
1.1k
views
Comment: C: How do we call this phenomenon in evolution?
5.4 years ago by johnnytam100 ▴ 110
0
votes
3
replies
1.1k
views
How do we call this phenomenon in evolution?
evolution
5.4 years ago by johnnytam100 ▴ 110
0
votes
3
replies
941
views
When will the blast program stops giving out hits if there are too many (for web server and standalone)
blast
updated 5.4 years ago by 20 • written 5.5 years ago by ▴ 110
0
votes
0
replies
2.5k
views
Comment: C: How to query taxonomy ID using protein accession ID in NCBI or Uniprot?
5.4 years ago by johnnytam100 ▴ 110
1
vote
1
reply
2.5k
views
How to query taxonomy ID using protein accession ID in NCBI or Uniprot?
ncbi uniprot taxonomy
5.4 years ago by johnnytam100 ▴ 110
0
votes
1
reply
852
views
Comment: C: How could we compare the extent of evolution between two species?
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
1.1k
views
Comment: C: What is the standard way of preparing homolog sequences for a phylogenetic analy
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
1.1k
views
Comment: C: What is the standard way of preparing homolog sequences for a phylogenetic analy
5.5 years ago by johnnytam100 ▴ 110
0
votes
3
replies
852
views
How could we compare the extent of evolution between two species?
evolution
5.5 years ago by johnnytam100 ▴ 110
3
votes
6
replies
1.1k
views
What is the standard way of preparing homolog sequences for a phylogenetic analysis?
phylogenetic tree homolog
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
997
views
Comment: C: Getting loadings of components from pcaMethods
5.5 years ago by johnnytam100 ▴ 110
0
votes
2
replies
997
views
Getting loadings of components from pcaMethods
pcamethods pca
updated 5.5 years ago by 8.3k • written 5.5 years ago by ▴ 110
0
votes
0
replies
868
views
Package or server to make peptide fragment library for ab initio structural modeling?
ab initio structural modeling
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
941
views
Comment: C: When will the blast program stops giving out hits if there are too many (for web
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
1
vote
1
reply
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: So frustrated compiling necessary packages in a linux system
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
1.1k
views
Comment: C: Working Principle of Ancestral Sequence Reconstruction (ASR)
5.5 years ago by johnnytam100 ▴ 110
1
vote
2
replies
1.1k
views
Working Principle of Ancestral Sequence Reconstruction (ASR)
ancestral seqeunce reconstruction
updated 5.5 years ago by ★ 3.8k • written 5.5 years ago by ▴ 110
5
votes
6
replies
1.5k
views
How to reformat (i.e. to clean) NCBI .fasta archives into a singleline .fasta with only the unique identifier before each seqeunce?
linux bash ncbi fasta
updated 5.5 years ago by ★ 2.0k • written 5.5 years ago by ▴ 110
0
votes
0
replies
1.5k
views
Comment: C: How to reformat (i.e. to clean) NCBI .fasta archives into a singleline .fasta wi
5.5 years ago by johnnytam100 ▴ 110
0
votes
0
replies
1.5k
views
Comment: C: How to reformat (i.e. to clean) NCBI .fasta archives into a singleline .fasta wi
5.5 years ago by johnnytam100 ▴ 110
1
vote
1
reply
990
views
Is there any database that correlates annotation of a set of genes or gene ontology with the upstream regulatory genes (e.g. transcription factor)?
gene regulatory netwrok
updated 6.3 years ago by 27k • written 6.3 years ago by ▴ 110
0
votes
0
replies
1.5k
views
Transposable element (TE) of plants, how conserved and options for blastn?
transposable element TE blastn
updated 6.3 years ago by 20 • written 6.6 years ago by ▴ 110
2
votes
2
replies
4.0k
views
samtools sort failed to merge tmp .bam file
samtools bwa bam
6.3 years ago by johnnytam100 ▴ 110
0
votes
2
replies
1.7k
views
How to overlap the coverage profiles of read-mapping in IGV or other mapping result visualization tools?
IGV mapping bwa
updated 6.4 years ago by ★ 1.5k • written 6.6 years ago by ▴ 110
1
vote
1
reply
4.0k
views
Pindel during compile : pindel.h:35:24: error: htslib/sam.h: No such file or directory
pindel htslib
updated 6.5 years ago by 20 • written 6.6 years ago by ▴ 110
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